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[HTML][HTML] Single-strand annealing in cancer
J Blasiak - International Journal of Molecular Sciences, 2021 - mdpi.com
DNA double-strand breaks (DSBs) are among the most serious forms of DNA damage. In
humans, DSBs are repaired mainly by non-homologous end joining (NHEJ) and …
humans, DSBs are repaired mainly by non-homologous end joining (NHEJ) and …
Investigating mobile element variations by statistical genetics
S Kojima - Human Genome Variation, 2024 - nature.com
The integration of structural variations (SVs) in statistical genetics provides an opportunity to
understand the genetic factors influencing complex human traits and disease. Recent …
understand the genetic factors influencing complex human traits and disease. Recent …
Characterizing mobile element insertions in 5675 genomes
Mobile element insertions (MEIs) are a major class of structural variants (SVs) and have
been linked to many human genetic disorders, including hemophilia, neurofibromatosis, and …
been linked to many human genetic disorders, including hemophilia, neurofibromatosis, and …
Contribution of unfixed transposable element insertions to human regulatory variation
C Goubert, NA Zevallos… - … Transactions of the …, 2020 - royalsocietypublishing.org
Thousands of unfixed transposable element (TE) insertions segregate in the human
population, but little is known about their impact on genome function. Recently, a few studies …
population, but little is known about their impact on genome function. Recently, a few studies …
Identification and characterisation of endogenous Avian Leukosis Virus subgroup E (ALVE) insertions in chicken whole genome sequencing data
Abstract Background Endogenous retroviruses (ERVs) are the remnants of retroviral
infections which can elicit prolonged genomic and immunological stress on their host …
infections which can elicit prolonged genomic and immunological stress on their host …
The Simons Genome Diversity Project: a global analysis of mobile element diversity
Ongoing retrotransposition of Alu, LINE-1, and SINE–VNTR–Alu elements generates
diversity and variation among human populations. Previous analyses investigating the …
diversity and variation among human populations. Previous analyses investigating the …
Identification and genoty** of transposable element insertions from genome sequencing data
Transposable element (TE) mobilization is a significant source of genomic variation and has
been associated with various human diseases. The exponential growth of population‐scale …
been associated with various human diseases. The exponential growth of population‐scale …
Genoty** of transposable element insertions segregating in human populations using short-read realignments
Transposable element (TE) insertions are a major source of structural variation in the human
genome. Due to the repetitive nature and biological importance of TEs, many bioinformatic …
genome. Due to the repetitive nature and biological importance of TEs, many bioinformatic …
Transposable Element Structural Variants in Parkinson's Disease: Focusing on Genoty** Alu Transposable Element Insertions with TypeTE
Genetic variation contributes significantly to Parkinson's disease (PD) risk, onset, and
progression. However, most of the common genetic variation that contributes to PD is still …
progression. However, most of the common genetic variation that contributes to PD is still …
Detecting signatures of TE polymorphisms in short-read sequencing data
C Stritt, AC Roulin - Plant Transposable Elements: Methods and Protocols, 2021 - Springer
Transposable elements (TEs) are an important cause of evolutionary change and functional
diversity, yet they are routinely discarded in the first steps of many analyses. In this chapter …
diversity, yet they are routinely discarded in the first steps of many analyses. In this chapter …