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[HTML][HTML] The phylogeny and evolutionary history of arthropods
Arthropods are the most diverse animal phylum, and their phylogenetic relationships have
been debated for centuries. With the advent of molecular phylogenetics, arthropods were …
been debated for centuries. With the advent of molecular phylogenetics, arthropods were …
Immune memory in invertebrates
Evidence for innate immune memory (or 'priming') in invertebrates has been accumulating
over the last years. We here provide an in-depth review of the current state of evidence for …
over the last years. We here provide an in-depth review of the current state of evidence for …
Evolutionary history of the Hymenoptera
Summary Hymenoptera (sawflies, wasps, ants, and bees) are one of four mega-diverse
insect orders, comprising more than 153,000 described and possibly up to one million …
insect orders, comprising more than 153,000 described and possibly up to one million …
Terrace aware data structure for phylogenomic inference from supermatrices
In phylogenomics the analysis of concatenated gene alignments, the so-called supermatrix,
is commonly accompanied by the assumption of partition models. Under such models each …
is commonly accompanied by the assumption of partition models. Under such models each …
Phylogenomics and the evolution of hemipteroid insects
Hemipteroid insects (Paraneoptera), with over 10% of all known insect diversity, are a major
component of terrestrial and aquatic ecosystems. Previous phylogenetic analyses have not …
component of terrestrial and aquatic ecosystems. Previous phylogenetic analyses have not …
Phylogenomics resolves the timing and pattern of insect evolution
Insects are the most speciose group of animals, but the phylogenetic relationships of many
major lineages remain unresolved. We inferred the phylogeny of insects from 1478 protein …
major lineages remain unresolved. We inferred the phylogeny of insects from 1478 protein …
Selecting optimal partitioning schemes for phylogenomic datasets
Background Partitioning involves estimating independent models of molecular evolution for
different subsets of sites in a sequence alignment, and has been shown to improve …
different subsets of sites in a sequence alignment, and has been shown to improve …
Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy
JP Meier-Kolthoff, RL Hahnke, J Petersen… - Standards in genomic …, 2014 - Springer
Although Escherichia coli is the most widely studied bacterial model organism and often
considered to be the model bacterium per se, its type strain was until now forgotten from …
considered to be the model bacterium per se, its type strain was until now forgotten from …
FASconCAT-G: extensive functions for multiple sequence alignment preparations concerning phylogenetic studies
Background Phylogenetic and population genetic studies often deal with multiple sequence
alignments that require manipulation or processing steps such as sequence concatenation …
alignments that require manipulation or processing steps such as sequence concatenation …
Phylogenomics of Rhodobacteraceae reveals evolutionary adaptation to marine and non-marine habitats
Abstract Marine Rhodobacteraceae (Alphaproteobacteria) are key players of
biogeochemical cycling, comprise up to 30% of bacterial communities in pelagic …
biogeochemical cycling, comprise up to 30% of bacterial communities in pelagic …