Antibiotics, resistome and resistance mechanisms: A bacterial perspective

I Sultan, S Rahman, AT Jan, MT Siddiqui… - Frontiers in …, 2018 - frontiersin.org
History of mankind is regarded as struggle against infectious diseases. Rather than
observing the withering away of bacterial diseases, antibiotic resistance has emerged as a …

Integrons

G Cambray, AM Guerout, D Mazel - Annual review of genetics, 2010 - annualreviews.org
Integrons are genetic elements able to acquire and rearrange open reading frames (ORFs)
embedded in gene cassette units and convert them to functional genes by ensuring their …

Transposon-encoded CRISPR–Cas systems direct RNA-guided DNA integration

SE Klompe, PLH Vo, TS Halpin-Healy, SH Sternberg - Nature, 2019 - nature.com
Conventional CRISPR–Cas systems maintain genomic integrity by leveraging guide RNAs
for the nuclease-dependent degradation of mobile genetic elements, including plasmids and …

Pathogenicity Factors of Genomic Islands in Intestinal and Extraintestinal Escherichia coli

M Desvaux, G Dalmasso, R Beyrouthy… - Frontiers in …, 2020 - frontiersin.org
Escherichia coli is a versatile bacterial species that includes both harmless commensal
strains and pathogenic strains found in the gastrointestinal tract in humans and warm …

Conjugative and mobilizable genomic islands in bacteria: evolution and diversity

X Bellanger, S Payot… - FEMS Microbiology …, 2014 - academic.oup.com
Horizontal transfer of genomic islands (GEIs), that is, chromosomal regions encoding
functions that can be advantageous for the host, plays a key role in bacterial evolution, but …

Core defense hotspots within Pseudomonas aeruginosa are a consistent and rich source of anti-phage defense systems

MC Johnson, E Laderman, E Huiting… - Nucleic acids …, 2023 - academic.oup.com
Bacteria use a diverse arsenal of anti-phage immune systems, including CRISPR-Cas and
restriction enzymes. Recent advances in anti-phage system discovery and annotation tools …

The chromosomal organization of horizontal gene transfer in bacteria

PH Oliveira, M Touchon, J Cury, EPC Rocha - Nature communications, 2017 - nature.com
Bacterial adaptation is accelerated by the acquisition of novel traits through horizontal gene
transfer, but the integration of these genes affects genome organization. We found that …

Hijackers, hitchhikers, or co-drivers? The mysteries of mobilizable genetic elements

M Ares-Arroyo, C Coluzzi, JA Moura de Sousa… - PLoS …, 2024 - journals.plos.org
Mobile genetic elements shape microbial gene repertoires and populations. Recent results
reveal that many, possibly most, microbial mobile genetic elements require helpers to …

Transfer of antibiotic-resistance genes via phage-related mobile elements

M Brown-Jaque, W Calero-Cáceres, M Muniesa - Plasmid, 2015 - Elsevier
Antibiotic resistance is a major concern for society because it threatens the effective
prevention of infectious diseases. While some bacterial strains display intrinsic resistance …

Genomic insights into bifidobacteria

JH Lee, DJ O'Sullivan - Microbiology and Molecular Biology …, 2010 - Am Soc Microbiol
Since the discovery in 1899 of bifidobacteria as numerically dominant microbes in the feces
of breast-fed infants, there have been numerous studies addressing their role in modulating …