Complexity of the alternative splicing landscape in plants

ASN Reddy, Y Marquez, M Kalyna, A Barta - The Plant Cell, 2013 - academic.oup.com
Alternative splicing (AS) of precursor mRNAs (pre-mRNAs) from multiexon genes allows
organisms to increase their coding potential and regulate gene expression through multiple …

[HTML][HTML] Alternative splicing: new insights from global analyses

BJ Blencowe - Cell, 2006 - cell.com
Recent analyses of sequence and microarray data have suggested that alternative splicing
plays a major role in the generation of proteomic and functional diversity in metazoan …

The polyploidy revolution then… and now: Stebbins revisited

DE Soltis, CJ Visger, PS Soltis - American journal of botany, 2014 - Wiley Online Library
Polyploidy has long been considered a major force in plant evolution. G. Ledyard Stebbins,
Jr., an architect of the Modern Synthesis, elegantly addressed a broad range of topics, from …

Global dissection of alternative splicing in paleopolyploid soybean

Y Shen, Z Zhou, Z Wang, W Li, C Fang, M Wu… - The Plant …, 2014 - academic.oup.com
Alternative splicing (AS) is common in higher eukaryotes and plays an important role in
gene posttranscriptional regulation. It has been suggested that AS varies dramatically …

Alternative splicing and the evolution of phenotypic novelty

SJ Bush, L Chen… - … Transactions of the …, 2017 - royalsocietypublishing.org
Alternative splicing, a mechanism of post-transcriptional RNA processing whereby a single
gene can encode multiple distinct transcripts, has been proposed to underlie morphological …

RNA-seq analyses of multiple meristems of soybean: novel and alternative transcripts, evolutionary and functional implications

L Wang, C Cao, Q Ma, Q Zeng, H Wang, Z Cheng… - BMC plant biology, 2014 - Springer
Background Soybean is one of the most important crops, providing large amounts of dietary
proteins and edible oil, and is also an excellent model for studying evolution of duplicated …

Genome-wide analyses of alternative splicing in plants: opportunities and challenges

WB Barbazuk, Y Fu, KM McGinnis - Genome research, 2008 - genome.cshlp.org
Alternative splicing (AS) creates multiple mRNA transcripts from a single gene. While AS is
known to contribute to gene regulation and proteome diversity in animals, the study of its …

Nonadditive gene expression in polyploids

MJ Yoo, X Liu, JC Pires, PS Soltis… - Annual review of …, 2014 - annualreviews.org
Allopolyploidy involves hybridization and duplication of divergent parental genomes and
provides new avenues for gene expression. The expression levels of duplicated genes in …

Evolution of the ARF gene family in land plants: old domains, new tricks

C Finet, A Berne-Dedieu, CP Scutt… - Molecular Biology and …, 2013 - academic.oup.com
Auxin response factors (ARF) are key players in plant development. They mediate the
cellular response to the plant hormone auxin by activating or repressing the expression of …

Alternative splicing: current perspectives

E Kim, A Goren, G Ast - Bioessays, 2008 - Wiley Online Library
Alternative splicing is a well‐characterized mechanism by which multiple transcripts are
generated from a single mRNA precursor. By allowing production of several protein isoforms …