Regulation of ribosomal protein genes: An ordered anarchy

C Petibon, M Malik Ghulam, M Catala… - Wiley Interdisciplinary …, 2021 - Wiley Online Library
Ribosomal protein genes are among the most highly expressed genes in most cell types.
Their products are generally essential for ribosome synthesis, which is the cornerstone for …

Plant 3'regulatory regions from mRNA-encoding genes and their uses to modulate expression

WS Bernardes, M Menossi - Frontiers in Plant Science, 2020 - frontiersin.org
Molecular biotechnology has made it possible to explore the potential of plants for different
purposes. The 3'regulatory regions have a great diversity of cis-regulatory elements directly …

Tissue‐specific mechanisms of alternative polyadenylation: Testis, brain, and beyond (2018 update)

CC MacDonald - Wiley Interdisciplinary Reviews: RNA, 2019 - Wiley Online Library
Alternative polyadenylation (APA) is how genes choose different sites for 3′ end formation
for mRNAs during transcription. APA often occurs in a tissue‐or developmental stage …

Differential alternative polyadenylation of homoeologous genes of allohexaploid wheat ABD subgenomes during drought stress response

H Ma, J Lin, F Mei, H Mao, QQ Li - The Plant Journal, 2023 - Wiley Online Library
Because allohexaploid wheat genome contains ABD subgenomes, how the expression of
homoeologous genes is coordinated remains largely unknown, particularly at the co …

Template-switching artifacts resemble alternative polyadenylation

Z Balázs, D Tombácz, Z Csabai, N Moldován, M Snyder… - BMC genomics, 2019 - Springer
Background Alternative polyadenylation is commonly examined using cDNA sequencing,
which is known to be affected by template-switching artifacts. However, the effects of such …

Wide‐ranging transcriptome remodelling mediated by alternative polyadenylation in response to abiotic stresses in Sorghum

M Chakrabarti, L de Lorenzo… - The Plant …, 2020 - Wiley Online Library
Alternative polyadenylation (APA) regulates diverse developmental and physiological
processes through its effects on gene expression, mRNA stability, translatability, and …

Combined growth index determination and high-throughput sequencing provides new insights into wood formation in poplar

T Shen, H Qi, H Zhang, F Cui, H Pan, M Xu - Industrial Crops and Products, 2023 - Elsevier
Wood is the raw material used in the production of paper and building materials. It also plays
an important role in human productivity and survival. However, the regulatory mechanisms …

Alternative polyadenylated mRNAs behave as asynchronous rhythmic transcription in Arabidopsis

J Lin, Z Yu, C Ye, L Hong, Y Chu, Y Shen, QQ Li - RNA biology, 2021 - Taylor & Francis
Alternative polyadenylation (APA) is a widespread post-transcriptional modification method
that changes the 3′ ends of transcripts by altering poly (A) site usage. However, the …

Expression and variation of the genes involved in rhizobium nodulation in red clover

RD Dinkins, JA Hancock, DM Bickhart, ML Sullivan… - Plants, 2022 - mdpi.com
Red clover (Trifolium pratense L.) is an important forage crop and serves as a major
contributor of nitrogen input in pasture settings because of its ability to fix atmospheric …

Abscisic Acid Metabolism in Leaves and Roots of Four Vitis Species in Response to Water Deficit

HS Toups, N Cochetel, K Galdamez, L Deluc… - 2021 - researchsquare.com
Background: Abscisic acid is a phytohormone involved in water deficit response. Abscisic
acid metabolism is regulated by biosynthesis, conjugation, and catabolism. NCED3 is the …