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Profiling cell identity and tissue architecture with single-cell and spatial transcriptomics
Single-cell transcriptomics has broadened our understanding of cellular diversity and gene
expression dynamics in healthy and diseased tissues. Recently, spatial transcriptomics has …
expression dynamics in healthy and diseased tissues. Recently, spatial transcriptomics has …
Light sheet fluorescence microscopy
Light sheet fluorescence microscopy (LSFM) uses a thin sheet of light to excite only
fluorophores within the focal volume. Light sheet microscopes (LSMs) have a true optical …
fluorophores within the focal volume. Light sheet microscopes (LSMs) have a true optical …
SpaceM reveals metabolic states of single cells
A growing appreciation of the importance of cellular metabolism and revelations concerning
the extent of cell–cell heterogeneity demand metabolic characterization of individual cells …
the extent of cell–cell heterogeneity demand metabolic characterization of individual cells …
Pathogenic variants damage cell composition and single cell transcription in cardiomyopathies
D Reichart, EL Lindberg, H Maatz, AMA Miranda… - Science, 2022 - science.org
Pathogenic variants in genes that cause dilated cardiomyopathy (DCM) and arrhythmogenic
cardiomyopathy (ACM) convey high risks for the development of heart failure through …
cardiomyopathy (ACM) convey high risks for the development of heart failure through …
Coordinated cellular neighborhoods orchestrate antitumoral immunity at the colorectal cancer invasive front
Antitumoral immunity requires organized, spatially nuanced interactions between
components of the immune tumor microenvironment (iTME). Understanding this coordinated …
components of the immune tumor microenvironment (iTME). Understanding this coordinated …
Virtual histological staining of unlabelled tissue-autofluorescence images via deep learning
The histological analysis of tissue samples, widely used for disease diagnosis, involves
lengthy and laborious tissue preparation. Here, we show that a convolutional neural network …
lengthy and laborious tissue preparation. Here, we show that a convolutional neural network …
Dendritic action potentials and computation in human layer 2/3 cortical neurons
The active electrical properties of dendrites shape neuronal input and output and are
fundamental to brain function. However, our knowledge of active dendrites has been almost …
fundamental to brain function. However, our knowledge of active dendrites has been almost …
Deep profiling of mouse splenic architecture with CODEX multiplexed imaging
A highly multiplexed cytometric imaging approach, termed co-detection by indexing
(CODEX), is used here to create multiplexed datasets of normal and lupus (MRL/lpr) murine …
(CODEX), is used here to create multiplexed datasets of normal and lupus (MRL/lpr) murine …
Deep learning enables cross-modality super-resolution in fluorescence microscopy
We present deep-learning-enabled super-resolution across different fluorescence
microscopy modalities. This data-driven approach does not require numerical modeling of …
microscopy modalities. This data-driven approach does not require numerical modeling of …
BAK/BAX macropores facilitate mitochondrial herniation and mtDNA efflux during apoptosis
INTRODUCTION There has been an explosion of interest in the role of cell death pathways
and damage-associated molecular pattern (DAMP) signaling in sha** inflammatory and …
and damage-associated molecular pattern (DAMP) signaling in sha** inflammatory and …