Genomic newborn screening for rare diseases

Z Stark, RH Scott - Nature Reviews Genetics, 2023 - nature.com
Rare diseases are a leading cause of infant mortality and lifelong disability. To improve
outcomes, timely diagnosis and effective treatments are needed. Genomic sequencing has …

[HTML][HTML] Will variants of uncertain significance still exist in 2030?

DM Fowler, HL Rehm - The American Journal of Human Genetics, 2024 - cell.com
Summary In 2020, the National Human Genome Research Institute (NHGRI) made ten" bold
predictions," including that" the clinical relevance of all encountered genomic variants will be …

Sequence modeling and design from molecular to genome scale with Evo

E Nguyen, M Poli, MG Durrant, B Kang, D Katrekar… - Science, 2024 - science.org
The genome is a sequence that encodes the DNA, RNA, and proteins that orchestrate an
organism's function. We present Evo, a long-context genomic foundation model with a …

The Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update

Nucleic acids research, 2024 - academic.oup.com
Abstract Galaxy (https://galaxyproject. org) is deployed globally, predominantly through free-
to-use services, supporting user-driven research that broadens in scope each year. Users …

Packaging research artefacts with RO-Crate

S Soiland-Reyes, P Sefton, M Crosas… - Data …, 2022 - journals.sagepub.com
An increasing number of researchers support reproducibility by including pointers to and
descriptions of datasets, software and methods in their publications. However, scientific …

[PDF][PDF] Precision Medicine and Genomics: A comprehensive review of IT-enabled approaches

FC Udegbe, OR Ebulue, CC Ebulue… - International Medical …, 2024 - researchgate.net
PRECISION MEDICINE AND GENOMICS: A COMPREHENSIVE REVIEW OF IT-ENABLED
APPROACHES Page 1 International Medical Science Research Journal, Volume 4, Issue 4 …

Challenges and opportunities in sharing microbiome data and analyses

C Huttenhower, RD Finn, AC McHardy - Nature Microbiology, 2023 - nature.com
Microbiome data, metadata and analytical workflows have become 'big'in terms of volume
and complexity. Although the infrastructure and technologies to share data have been …

Implementation of precision medicine in healthcare—A European perspective

A Stenzinger, EK Moltzen, E Winkler… - Journal of Internal …, 2023 - Wiley Online Library
The technical development of high‐throughput sequencing technologies and the parallel
development of targeted therapies in the last decade have enabled a transition from …

Inverting the model of genomics data sharing with the NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-space

MC Schatz, AA Philippakis, E Afgan, E Banks, VJ Carey… - Cell Genomics, 2022 - cell.com
Summary The NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-
space (AnVIL; https://anvilproject. org) was developed to address a widespread community …

The GA4GH Phenopacket schema defines a computable representation of clinical data

JOB Jacobsen, M Baudis, GS Baynam… - Nature …, 2022 - nature.com
TG is a shareholder of Westlake Omics Inc. TI is a cofounder of Data4Cure, is on the
Scientific Advisory Board and has an equity interest. TI is on the Scientific Advisory Board of …