Detecting liquid remnants of solid tumors: circulating tumor DNA minimal residual disease

EJ Moding, BY Nabet, AA Alizadeh, M Diehn - Cancer discovery, 2021 - AACR
Growing evidence demonstrates that circulating tumor DNA (ctDNA) minimal residual
disease (MRD) following treatment for solid tumors predicts relapse. These results suggest …

Clinical cancer genomic profiling

D Chakravarty, DB Solit - Nature Reviews Genetics, 2021 - nature.com
Technological innovation and rapid reduction in sequencing costs have enabled the
genomic profiling of hundreds of cancer-associated genes as a component of routine cancer …

Evaluating the analytical validity of circulating tumor DNA sequencing assays for precision oncology

IW Deveson, B Gong, K Lai, JS LoCoco… - Nature …, 2021 - nature.com
Circulating tumor DNA (ctDNA) sequencing is being rapidly adopted in precision oncology,
but the accuracy, sensitivity and reproducibility of ctDNA assays is poorly understood. Here …

DNA liquid biopsy-based prediction of cancer-associated venous thromboembolism

J Jee, AR Brannon, R Singh, A Derkach, C Fong… - Nature Medicine, 2024 - nature.com
Cancer-associated venous thromboembolism (VTE) is a major source of oncologic cost,
morbidity and mortality. Identifying high-risk patients for prophylactic anticoagulation is …

Overall survival with circulating tumor DNA-guided therapy in advanced non-small-cell lung cancer

J Jee, ES Lebow, R Yeh, JP Das, A Namakydoust… - Nature medicine, 2022 - nature.com
Circulating tumor DNA (ctDNA) sequencing guides therapy decisions but has been studied
mostly in small cohorts without sufficient follow-up to determine its influence on overall …

A performance comparison of commonly used assays to detect RET fusions

SR Yang, U Aypar, EY Rosen, DA Mata… - Clinical Cancer …, 2021 - AACR
Purpose: Selpercatinib and pralsetinib induce deep and durable responses in patients with
advanced RET fusion–positive lung and thyroid cancer. RET fusion testing strategies with …

[HTML][HTML] Retrospective evaluation of somatic alterations in cell-free DNA from blood in retinoblastoma

DH Abramson, D Mandelker, JH Francis, IJ Dunkel… - Ophthalmology …, 2021 - Elsevier
Purpose Analysis of circulating tumor DNA (ctDNA) in the plasma of patients with
retinoblastoma and simulating lesions. Design Retrospective cross-sectional study of the …

NGS and FISH for MET amplification detection in EGFR TKI resistant non-small cell lung cancer (NSCLC) patients: a prospective, multicenter study in China

Q Zheng, X Lin, W Qi, J Yin, J Li, Y Wang, W Wang… - Lung Cancer, 2024 - Elsevier
Abstract Objectives Comprehensive data using Next-Generation Sequence (NGS) and
fluorescence in situ hybridization (FISH) for detecting MET amplification is limited in Chinese …

Mutant-RB1 circulating tumor DNA in the blood of unilateral retinoblastoma patients: What happens during enucleation surgery: A pilot study

DH Abramson, DL Mandelker, AR Brannon, IJ Dunkel… - Plos one, 2023 - journals.plos.org
Cell free DNA (cf DNA) and circulating tumor cell free DNA (ct DNA) from blood (plasma) are
increasingly being used in oncology for diagnosis, monitoring response, identifying cancer …

Matched molecular profiling of cell-free DNA and tumor tissue in patients with advanced clear cell renal cell carcinoma

RR Kotecha, E Gedvilaite, R Ptashkin… - JCO Precision …, 2022 - ascopubs.org
PURPOSE The clinical utility of cell-free DNA (cfDNA) as a biomarker for advanced clear cell
renal cell carcinoma (ccRCC) remains unclear. We evaluated the validity of cfDNA-based …