The exponential growth of big data in RNA biology (RB) has led to the development of deep
learning (DL) models that have driven crucial discoveries. As constantly evidenced by DL …

This review paper provides an extensive analysis of the rapidly evolving convergence of
deep learning and long non-coding RNAs (lncRNAs). Considering the recent advancements …

Enhancers play a crucial role in controlling gene transcription and expression. Therefore,
bioinformatics puts many emphases on predicting enhancers and their strength. It is vital to …

Circular RNAs (circRNAs) have been found to have the ability to encode proteins through
internal ribosome entry sites (IRESs), which are essential RNA regulatory elements for cap …

Abstract N6-methyladenosine (m6A) is the most prevalent, abundant, and conserved
internal modification in the eukaryotic messenger RNA (mRNAs) and plays a crucial role in …

The promoter is a key DNA sequence whose primary function is to control the initiation time
and the degree of expression of gene transcription. Accurate identification of promoters is …

Long noncoding RNAs (lncRNAs) have been discovered to be extensively involved in
eukaryotic epigenetic, transcriptional, and post-transcriptional regulatory processes with the …

The bendability of genomic DNA, which measures the DNA loo** rate, is crucial for
numerous biological processes of DNA. Recently, an advanced high-throughput technique …

Promoters are DNA sequences that bind with RNA polymerase to initiate transcription,
regulating this process through interactions with transcription factors. Accurate identification …

Enhancers, genomic DNA elements, regulate neighboring gene expression crucial for
biological processes like cell differentiation and stress response. However, current machine …