Activity-driven polymer knotting for macromolecular topology engineering

JX Li, S Wu, LL Hao, QL Lei, YQ Ma - Science Advances, 2024 - science.org
Macromolecules can gain special properties by adopting knotted conformations, but
engineering knotted macromolecules is a challenging task. Here, we unexpectedly find that …

Kinetoplast DNA: a polymer physicist's topological Olympic dream

D Michieletto - Nucleic Acids Research, 2025 - academic.oup.com
All life forms are miraculous, but some are more inexplicable than others. Trypanosomes are
by far one of the most puzzling organisms on Earth: their mitochondrial genome, also called …

[HTML][HTML] Topological foundations of ferroelectricity

IA Lukyanchuk, AG Razumnaya, S Kondovych… - Physics Reports, 2025 - Elsevier
The 21st century has witnessed a revolutionary shift in the understanding of properties of
matter driven by the application of topological principles. While the traditional approach to …

Fluidification of entangled polymers by loop extrusion

F Conforto, Y Gutierrez Fosado, D Michieletto - Physical Review Research, 2024 - APS
Loop extrusion is one of the main processes sha** chromosome organization across the
cell cycle, yet its role in regulating deoxyribonucleic acid (DNA) entanglement and …

Measuring topological constraint relaxation in ring-linear polymer blends

DL Vigil, T Ge, M Rubinstein, TC O'Connor, GS Grest - Physical Review Letters, 2024 - APS
Polymers are an effective test bed for studying topological constraints in condensed matter
due to a wide array of synthetically available chain topologies. When linear and ring …

Topological linking determines elasticity in limited valence networks

G Palombo, S Weir, D Michieletto… - Nature Materials, 2025 - nature.com
Understanding the relationship between the microscopic structure and topology of a material
and its macroscopic properties is a fundamental challenge across a wide range of systems …

Is There a Functional Role for the Knotted Topology in Protein UCH-L1?

SGF Ferreira, MK Sriramoju, STD Hsu… - Journal of Chemical …, 2024 - ACS Publications
Knotted proteins are present in nature, but there is still an open issue regarding the
existence of a universal role for these remarkable structures. To address this question, we …

Tracking topological defects in a plasma state of a quenched colloidal ice

M Ostinato, P Tierno - Physical Review B, 2025 - APS
In frustrated spin systems, creation and annihilation of topological defects are processes that
are hard to characterize and information about them is often extracted by measuring …

Rheology of Ring Copolymers in Dilute Solutions

S Kumar, P Biswas - The Journal of Physical Chemistry B, 2024 - ACS Publications
We investigate the rheology of ring copolymers theoretically within the framework of the
optimized Rouse–Zimm theory in dilute solutions. The ring copolymer is composed of two …

Effect of simple shear on knotted polymer coils and globules

A Milchev, MP Schmitt, P Virnau - The Journal of Chemical Physics, 2024 - pubs.aip.org
We explore the effect of Couette flow on knotted linear polymer chains with extensive
molecular dynamics simulations. Hydrodynamic interactions are accounted for using multi …