Engineering biological nanopore approaches toward protein sequencing
Biotechnological innovations have vastly improved the capacity to perform large-scale
protein studies, while the methods we have for identifying and quantifying individual proteins …
protein studies, while the methods we have for identifying and quantifying individual proteins …
VCP/p97-mediated unfolding as a principle in protein homeostasis and signaling
J van den Boom, H Meyer - Molecular cell, 2018 - cell.com
The AAA+-type ATPase p97 governs an ever-expanding number of cellular processes
reaching from degradation of damaged proteins and organelles to key signaling events and …
reaching from degradation of damaged proteins and organelles to key signaling events and …
Multiple rereads of single proteins at single–amino acid resolution using nanopores
A proteomics tool capable of identifying single proteins would be important for cell biology
research and applications. Here, we demonstrate a nanopore-based single-molecule …
research and applications. Here, we demonstrate a nanopore-based single-molecule …
The AAA+ superfamily: a review of the structural and mechanistic principles of these molecular machines
ATPases associated with diverse cellular activities (AAA+ proteins) are a superfamily of
proteins found throughout all domains of life. The hallmark of this family is a conserved …
proteins found throughout all domains of life. The hallmark of this family is a conserved …
Mechanistic insights into bacterial AAA+ proteases and protein-remodelling machines
AO Olivares, TA Baker, RT Sauer - Nature Reviews Microbiology, 2016 - nature.com
To maintain protein homeostasis, AAA+ proteolytic machines degrade damaged and
unneeded proteins in bacteria, archaea and eukaryotes. This process involves the ATP …
unneeded proteins in bacteria, archaea and eukaryotes. This process involves the ATP …
Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate
ClpXP is an ATP-dependent protease in which the ClpX AAA+ motor binds, unfolds, and
translocates specific protein substrates into the degradation chamber of ClpP. We present …
translocates specific protein substrates into the degradation chamber of ClpP. We present …
Regulated proteolysis in bacteria
SA Mahmoud, P Chien - Annual review of biochemistry, 2018 - annualreviews.org
Regulated proteolysis is a vital process that affects all living things. Bacteria use energy-
dependent AAA+ proteases to power degradation of misfolded and native regulatory …
dependent AAA+ proteases to power degradation of misfolded and native regulatory …
Stairway to translocation: AAA+ motor structures reveal the mechanisms of ATP‐dependent substrate translocation
Translocases of the AAA+ (ATPases Associated with various cellular Activities) family are
powerful molecular machines that use the mechano‐chemical coupling of ATP hydrolysis …
powerful molecular machines that use the mechano‐chemical coupling of ATP hydrolysis …
Next generation methods for single-molecule force spectroscopy on polyproteins and receptor-ligand complexes
Single-molecule force spectroscopy with the atomic force microscope provides molecular
level insights into protein function, allowing researchers to reconstruct energy landscapes …
level insights into protein function, allowing researchers to reconstruct energy landscapes …
Recent structural insights into the mechanism of ClpP protease regulation by AAA+ chaperones and small molecules
MF Mabanglo, WA Houry - Journal of Biological Chemistry, 2022 - ASBMB
ClpP is a highly conserved serine protease that is a critical enzyme in maintaining protein
homeostasis and is an important drug target in pathogenic bacteria and various cancers. In …
homeostasis and is an important drug target in pathogenic bacteria and various cancers. In …