Mechanisms regulating zygotic genome activation

KN Schulz, MM Harrison - Nature Reviews Genetics, 2019 - nature.com
Following fertilization, the two specified gametes must unite to create an entirely new
organism. The genome is initially transcriptionally quiescent, allowing the zygote to be …

Pioneer factors: roles and their regulation in development

A Barral, KS Zaret - Trends in Genetics, 2024 - cell.com
Pioneer factors are a subclass of transcription factors that can bind and initiate opening of
silent chromatin regions. Pioneer factors subsequently regulate lineage-specific genes and …

OBOX regulates mouse zygotic genome activation and early development

S Ji, F Chen, P Stein, J Wang, Z Zhou, L Wang, Q Zhao… - Nature, 2023 - nature.com
Zygotic genome activation (ZGA) activates the quiescent genome to enable the maternal-to-
zygotic transition,. However, the identity of transcription factors that underlie mammalian …

Zygotic genome activation by the totipotency pioneer factor Nr5a2

J Gassler, W Kobayashi, I Gáspár, S Ruangroengkulrith… - Science, 2022 - science.org
Life begins with a switch in genetic control from the maternal to the embryonic genome
during zygotic genome activation (ZGA). Despite its importance, the essential regulators of …

Chromatin accessibility in the Drosophila embryo is determined by transcription factor pioneering and enhancer activation

KJ Brennan, M Weilert, S Krueger, A Pampari, H Liu… - Developmental cell, 2023 - cell.com
Chromatin accessibility is integral to the process by which transcription factors (TFs) read out
cis-regulatory DNA sequences, but it is difficult to differentiate between TFs that drive …

The maternal-to-zygotic transition revisited

NL Vastenhouw, WX Cao, HD Lipshitz - Development, 2019 - journals.biologists.com
The development of animal embryos is initially directed by maternal gene products. Then,
during the maternal-to-zygotic transition (MZT), developmental control is handed to the …

Zygotic genome activation in vertebrates

D Jukam, SAM Shariati, JM Skotheim - Developmental cell, 2017 - cell.com
The first major developmental transition in vertebrate embryos is the maternal-to-zygotic
transition (MZT) when maternal mRNAs are degraded and zygotic transcription begins …

Cis-regulatory chromatin loops arise before TADs and gene activation, and are independent of cell fate during early Drosophila development

SM Espinola, M Götz, M Bellec, O Messina, JB Fiche… - Nature …, 2021 - nature.com
Acquisition of cell fate is thought to rely on the specific interaction of remote cis-regulatory
modules (CRMs), for example, enhancers and target promoters. However, the precise …

Transcriptional enhancers: from properties to genome-wide predictions

D Shlyueva, G Stampfel, A Stark - Nature Reviews Genetics, 2014 - nature.com
Cellular development, morphology and function are governed by precise patterns of gene
expression. These are established by the coordinated action of genomic regulatory …

Combinatorial function of transcription factors and cofactors

F Reiter, S Wienerroither, A Stark - Current opinion in genetics & …, 2017 - Elsevier
Differential gene expression gives rise to the many cell types of complex organisms.
Enhancers regulate transcription by binding transcription factors (TFs), which in turn recruit …