Electrostatic interactions in protein structure, folding, binding, and condensation

HX Zhou, X Pang - Chemical reviews, 2018 - ACS Publications
Charged and polar groups, through forming ion pairs, hydrogen bonds, and other less
specific electrostatic interactions, impart important properties to proteins. Modulation of the …

Intrinsically disordered protein regions and phase separation: sequence determinants of assembly or lack thereof.

EW Martin, AS Holehouse - Emerging topics in life sciences, 2020 - europepmc.org
Intrinsically disordered protein regions (IDRs)-regions that do not fold into a fixed three-
dimensional structure but instead exist in a heterogeneous ensemble of conformations-have …

Machine learning overcomes human bias in the discovery of self-assembling peptides

R Batra, TD Loeffler, H Chan, S Srinivasan, H Cui… - Nature …, 2022 - nature.com
Peptide materials have a wide array of functions, from tissue engineering and surface
coatings to catalysis and sensing. Tuning the sequence of amino acids that comprise the …

The antimicrobial peptide SAAP-148 combats drug-resistant bacteria and biofilms

A de Breij, M Riool, RA Cordfunke… - Science translational …, 2018 - science.org
Development of novel antimicrobial agents is a top priority in the fight against multidrug-
resistant (MDR) and persistent bacteria. We developed a panel of synthetic antimicrobial …

Intrinsically disordered sequences enable modulation of protein phase separation through distributed tyrosine motifs

Y Lin, SL Currie, MK Rosen - Journal of Biological Chemistry, 2017 - ASBMB
Liquid–liquid phase separation (LLPS) is thought to contribute to the establishment of many
biomolecular condensates, eukaryotic cell structures that concentrate diverse …

Exploring the sequence space for (tri-) peptide self-assembly to design and discover new hydrogels

PWJM Frederix, GG Scott, YM Abul-Haija… - Nature …, 2015 - nature.com
Peptides that self-assemble into nanostructures are of tremendous interest for biological,
medical, photonic and nanotechnological applications. The enormous sequence space that …

Folding and misfolding of human membrane proteins in health and disease: from single molecules to cellular proteostasis

JT Marinko, H Huang, WD Penn, JA Capra… - Chemical …, 2019 - ACS Publications
Advances over the past 25 years have revealed much about how the structural properties of
membranes and associated proteins are linked to the thermodynamics and kinetics of …

Peptide‐based coacervate‐core vesicles with semipermeable membranes

M Abbas, JO Law, SN Grellscheid… - Advanced …, 2022 - Wiley Online Library
Coacervates droplets have long been considered as potential protocells to mimic living
cells. However, these droplets lack a membrane and are prone to coalescence, limiting their …

Mechanisms of integral membrane protein insertion and folding

F Cymer, G Von Heijne, SH White - Journal of molecular biology, 2015 - Elsevier
The biogenesis, folding, and structure of α-helical membrane proteins (MPs) are important to
understand because they underlie virtually all physiological processes in cells including key …

Maximum allowed solvent accessibilites of residues in proteins

MZ Tien, AG Meyer, DK Sydykova, SJ Spielman… - PloS one, 2013 - journals.plos.org
The relative solvent accessibility (RSA) of a residue in a protein measures the extent of
burial or exposure of that residue in the 3D structure. RSA is frequently used to describe a …