Estimating SARS-CoV-2 seroprevalence and epidemiological parameters with uncertainty from serological surveys

DB Larremore, BK Fosdick, KM Bubar, S Zhang… - Elife, 2021 - elifesciences.org
Establishing how many people have been infected by SARS-CoV-2 remains an urgent
priority for controlling the COVID-19 pandemic. Serological tests that identify past infection …

Influential groups for seeding and sustaining nonlinear contagion in heterogeneous hypergraphs

G St-Onge, I Iacopini, V Latora, A Barrat, G Petri… - Communications …, 2022 - nature.com
Contagion phenomena are often the results of multibody interactions—such as
superspreading events or social reinforcement—describable as hypergraphs. We develop …

A survey of sampling method for social media embeddedness relationship

Y Cui, X Li, J Li, H Wang, X Chen - ACM Computing Surveys, 2022 - dl.acm.org
Social media embeddedness relationships consist of online social networks formed by self-
organized individual actors and significantly affect many aspects of our lives. Since the high …

Social confinement and mesoscopic localization of epidemics on networks

G St-Onge, V Thibeault, A Allard, LJ Dubé… - Physical review …, 2021 - APS
Recommendations around epidemics tend to focus on individual behaviors, with much less
efforts attempting to guide event cancellations and other collective behaviors since most …

Master equation analysis of mesoscopic localization in contagion dynamics on higher-order networks

G St-Onge, V Thibeault, A Allard, LJ Dubé… - Physical Review E, 2021 - APS
Simple models of infectious diseases tend to assume random mixing of individuals, but real
interactions are not random pairwise encounters: they occur within various types of …

Understanding the impact of digital contact tracing during the COVID-19 pandemic

A Burdinski, D Brockmann, BF Maier - PLOS Digital Health, 2022 - journals.plos.org
Digital contact tracing (DCT) applications have been introduced in many countries to aid the
containment of COVID-19 outbreaks. Initially, enthusiasm was high regarding their …

Fast and principled simulations of the SIR model on temporal networks

P Holme - Plos one, 2021 - journals.plos.org
The Susceptible–Infectious–Recovered (SIR) model is the canonical model of epidemics of
infections that make people immune upon recovery. Many of the open questions in …

Immunization strategies in networks with missing data

SF Rosenblatt, JA Smith, GR Gauthier… - PLoS computational …, 2020 - journals.plos.org
Network-based intervention strategies can be effective and cost-efficient approaches to
curtailing harmful contagions in myriad settings. As studied, these strategies are often …

[BOOK][B] Gillespie algorithms for stochastic multiagent dynamics in populations and networks

N Masuda, CL Vestergaard - 2022 - cambridge.org
Many multiagent dynamics can be modeled as a stochastic process in which the agents in
the system change their state over time in interaction with each other. The Gillespie …

Effective resistance against pandemics: Mobility network sparsification for high-fidelity epidemic simulations

A Mercier, S Scarpino, C Moore - PLOS Computational Biology, 2022 - journals.plos.org
Network science has increasingly become central to the field of epidemiology and our ability
to respond to infectious disease threats. However, many networks derived from modern …