Histone exchange, chromatin structure and the regulation of transcription

S Venkatesh, JL Workman - Nature reviews Molecular cell biology, 2015 - nature.com
The packaging of DNA into strings of nucleosomes is one of the features that allows
eukaryotic cells to tightly regulate gene expression. The ordered disassembly of …

Histone methylation: a dynamic mark in health, disease and inheritance

EL Greer, Y Shi - Nature Reviews Genetics, 2012 - nature.com
Organisms require an appropriate balance of stability and reversibility in gene expression
programmes to maintain cell identity or to enable responses to stimuli; epigenetic regulation …

Phase separation of RNA-binding protein promotes polymerase binding and transcription

W Shao, X Bi, Y Pan, B Gao, J Wu, Y Yin, Z Liu… - Nature Chemical …, 2022 - nature.com
An RNA-involved phase-separation model has been proposed for transcription control.
However, the molecular links that connect RNA to the transcription machinery remain …

Regulation of chromatin by histone modifications

AJ Bannister, T Kouzarides - Cell research, 2011 - nature.com
Chromatin is not an inert structure, but rather an instructive DNA scaffold that can respond to
external cues to regulate the many uses of DNA. A principle component of chromatin that …

Chromatin modifiers and remodellers: regulators of cellular differentiation

T Chen, SYR Dent - Nature Reviews Genetics, 2014 - nature.com
Cellular differentiation is, by definition, epigenetic. Genome-wide profiling of pluripotent cells
and differentiated cells suggests global chromatin remodelling during differentiation, which …

Understanding the language of Lys36 methylation at histone H3

EJ Wagner, PB Carpenter - Nature reviews Molecular cell biology, 2012 - nature.com
Histone side chains are post-translationally modified at multiple sites, including at Lys36 on
histone H3 (H3K36). Several enzymes from yeast and humans, including the …

Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S

H Guan, P Wang, P Zhang, C Ruan, Y Ou, B Peng… - Nature, 2023 - nature.com
Context-dependent dynamic histone modifications constitute a key epigenetic mechanism in
gene regulation,,–. The Rpd3 small (Rpd3S) complex recognizes histone H3 trimethylation …

Readers of histone modifications

M Yun, J Wu, JL Workman, B Li - Cell research, 2011 - nature.com
Histone modifications not only play important roles in regulating chromatin structure and
nuclear processes but also can be passed to daughter cells as epigenetic marks …

Roles of histone deacetylases in epigenetic regulation: emerging paradigms from studies with inhibitors

GP Delcuve, DH Khan, JR Davie - Clinical epigenetics, 2012 - Springer
The zinc-dependent mammalian histone deacetylase (HDAC) family comprises 11 enzymes,
which have specific and critical functions in development and tissue homeostasis. Mounting …

How chromatin-binding modules interpret histone modifications: lessons from professional pocket pickers

SD Taverna, H Li, AJ Ruthenburg, CD Allis… - Nature structural & …, 2007 - nature.com
Histones comprise the major protein component of chromatin, the scaffold in which the
eukaryotic genome is packaged, and are subject to many types of post-translational …