Single-cell transcriptome analysis in plants: advances and challenges
The rapid and enthusiastic adoption of single-cell RNA sequencing (scRNA-seq) has
demonstrated that this technology is far more than just another way to perform transcriptome …
demonstrated that this technology is far more than just another way to perform transcriptome …
Advances and opportunities in single-cell transcriptomics for plant research
Single-cell approaches are quickly changing our view on biological systems by increasing
the spatiotemporal resolution of our analyses to the level of the individual cell. The field of …
the spatiotemporal resolution of our analyses to the level of the individual cell. The field of …
A single-cell analysis of the Arabidopsis vegetative shoot apex
TQ Zhang, Y Chen, JW Wang - Developmental Cell, 2021 - cell.com
The shoot apical meristem allows for reiterative formation of new aerial structures throughout
the life cycle of a plant. We use single-cell RNA sequencing to define the cellular taxonomy …
the life cycle of a plant. We use single-cell RNA sequencing to define the cellular taxonomy …
Distinct identities of leaf phloem cells revealed by single cell transcriptomics
JY Kim, E Symeonidi, TY Pang, T Denyer… - The Plant …, 2021 - academic.oup.com
The leaf vasculature plays a key role in solute translocation. Veins consist of at least seven
distinct cell types, with specific roles in transport, metabolism, and signaling. Little is known …
distinct cell types, with specific roles in transport, metabolism, and signaling. Little is known …
Plant Metabolic Network 15: A resource of genome‐wide metabolism databases for 126 plants and algae
To understand and engineer plant metabolism, we need a comprehensive and accurate
annotation of all metabolic information across plant species. As a step towards this goal, we …
annotation of all metabolic information across plant species. As a step towards this goal, we …
Cell-by-cell dissection of phloem development links a maturation gradient to cell specialization
P Roszak, J Heo, B Blob, K Toyokura, Y Sugiyama… - Science, 2021 - science.org
INTRODUCTION The plant root grows indeterminately. Continual birth and maturation of
cells in a gradient along the root longitudinal axis requires tissue-wide coordination of cell …
cells in a gradient along the root longitudinal axis requires tissue-wide coordination of cell …
A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants
In all multicellular organisms, transcriptional networks orchestrate organ development. The
Arabidopsis root, with its simple structure and indeterminate growth, is an ideal model for …
Arabidopsis root, with its simple structure and indeterminate growth, is an ideal model for …
Single‐cell RNA‐seq reveals fate determination control of an individual fibre cell initiation in cotton (Gossypium hirsutum)
Y Qin, M Sun, W Li, M Xu, L Shao, Y Liu… - Plant Biotechnology …, 2022 - Wiley Online Library
Cotton fibre is a unicellular seed trichome, and lint fibre initials per seed as a factor
determines fibre yield. However, the mechanisms controlling fibre initiation from ovule …
determines fibre yield. However, the mechanisms controlling fibre initiation from ovule …
Nutrient–hormone relations: Driving root plasticity in plants
Optimal plant development requires root uptake of 14 essential mineral elements from the
soil. Since the bioavailability of these nutrients underlies large variation in space and time …
soil. Since the bioavailability of these nutrients underlies large variation in space and time …
Transport mechanisms of plant hormones
M Anfang, E Shani - Current Opinion in Plant Biology, 2021 - Elsevier
Plant growth, development, and response to the environment are mediated by a group of
small signaling molecules named hormones. Plants regulate hormone response pathways …
small signaling molecules named hormones. Plants regulate hormone response pathways …