Analyzing and modeling real-world phenomena with complex networks: a survey of applications
The success of new scientific areas can be assessed by their potential in contributing to new
theoretical approaches and in applications to real-world problems. Complex networks have …
theoretical approaches and in applications to real-world problems. Complex networks have …
Clique graphs and overlap** communities
TS Evans - Journal of Statistical Mechanics: Theory and …, 2010 - iopscience.iop.org
It is shown how to construct a clique graph in which properties of cliques of a fixed order in a
given graph are represented by vertices in a weighted graph. Various definitions and …
given graph are represented by vertices in a weighted graph. Various definitions and …
Map** drug-target interactions and synergy in multi-molecular therapeutics for pressure-overload cardiac hypertrophy
Advancements in systems biology have resulted in the development of network
pharmacology, leading to a paradigm shift from “one-target, one-drug” to “target-network …
pharmacology, leading to a paradigm shift from “one-target, one-drug” to “target-network …
[PDF][PDF] Dynamic network evolution: Models, clustering, anomaly detection
Traditionally, research on graph theory focused on studying graphs that are static. However,
almost all real networks are dynamic in nature and large in size. Quite recently, research …
almost all real networks are dynamic in nature and large in size. Quite recently, research …
Correlation between structure and temperature in prokaryotic metabolic networks
Background In recent years, an extensive characterization of network structures has been
made in an effort to elucidate design principles of metabolic networks, providing valuable …
made in an effort to elucidate design principles of metabolic networks, providing valuable …
Generating complex networks through a vertex merging mechanism: Empirical and analytical analysis
S Sidorov, S Mironov, TD Emelianov - Physica A: Statistical Mechanics and …, 2025 - Elsevier
One of the most well-known mechanisms contributing to the emergence of networks with a
power-law degree distribution is preferential attachment. In this study, we examined a family …
power-law degree distribution is preferential attachment. In this study, we examined a family …
Weighted evolving networks with self-organized communities
X Zhou, L **ang, W **ao-Fan - Communications in Theoretical …, 2008 - iopscience.iop.org
In order to describe the self-organization of communities in the evolution of weighted
networks, we propose a new evolving model for weighted community-structured networks …
networks, we propose a new evolving model for weighted community-structured networks …
Modeling for evolving biological networks with scale-free connectivity, hierarchical modularity, and disassortativity
K Takemoto, C Oosawa - Mathematical biosciences, 2007 - Elsevier
We propose a growing network model that consists of two tunable mechanisms: growth by
merging modules which are represented as complete graphs and a fitness-driven …
merging modules which are represented as complete graphs and a fitness-driven …
Structure of n-clique networks embedded in a complex network
We propose the n-clique network as a powerful tool for understanding global structures of
combined highly-interconnected subgraphs, and provide theoretical predictions for statistical …
combined highly-interconnected subgraphs, and provide theoretical predictions for statistical …
Emergence of modularity and disassortativity in protein-protein interaction networks
X Wan, S Cai, J Zhou, Z Liu - Chaos: An Interdisciplinary Journal of …, 2010 - pubs.aip.org
In this paper, we present a simple evolution model of protein-protein interaction networks by
introducing a rule of small-preference duplication of a node, meaning that the probability of a …
introducing a rule of small-preference duplication of a node, meaning that the probability of a …