A review on the recent developments of sequence-based protein feature extraction methods
J Zhang, B Liu - Current Bioinformatics, 2019 - ingentaconnect.com
Background: Proteins play a crucial role in life activities, such as catalyzing metabolic
reactions, DNA replication, responding to stimuli, etc. Identification of protein structures and …
reactions, DNA replication, responding to stimuli, etc. Identification of protein structures and …
Computational analysis and prediction of lysine malonylation sites by exploiting informative features in an integrative machine-learning framework
Y Zhang, R ** protein sequences to folds
Motivation Protein fold recognition is an important problem in structural bioinformatics.
Almost all traditional fold recognition methods use sequence (homology) comparison to …
Almost all traditional fold recognition methods use sequence (homology) comparison to …
[HTML][HTML] Pse-in-One 2.0: an improved package of web servers for generating various modes of pseudo components of DNA, RNA, and protein sequences
B Liu, H Wu, KC Chou - Natural science, 2017 - scirp.org
Pse-in-One 2.0 is a package of web-servers evolved from Pse-in-One (Liu, B., Liu, F., Wang,
X., Chen, J. Fang, L. & Chou, KC Nucleic Acids Research, 2015, 43: W65-W71). In order to …
X., Chen, J. Fang, L. & Chou, KC Nucleic Acids Research, 2015, 43: W65-W71). In order to …
Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou׳ s general PseAAC
Protein subcellular localization is defined as predicting the functioning location of a given
protein in the cell. It is considered an important step towards protein function prediction and …
protein in the cell. It is considered an important step towards protein function prediction and …
MULTiPly: a novel multi-layer predictor for discovering general and specific types of promoters
Motivation Promoters are short DNA consensus sequences that are localized proximal to the
transcription start sites of genes, allowing transcription initiation of particular genes …
transcription start sites of genes, allowing transcription initiation of particular genes …