Lytic transglycosylases in macromolecular transport systems of Gram-negative bacteria

G Koraimann - Cellular and Molecular Life Sciences CMLS, 2003 - Springer
The cell wall of Gram-negative bacteria is essential for the integrity of the bacterial cell but
also imposes a physical barrier to trans-envelope transport processes in which DNA and/or …

Critical evaluation of web-based prediction tools for human protein subcellular localization

Y Shen, Y Ding, J Tang, Q Zou… - Briefings in bioinformatics, 2020 - academic.oup.com
Human protein subcellular localization has an important research value in biological
processes, also in elucidating protein functions and identifying drug targets. Over the past …

Genome sequence of mungbean and insights into evolution within Vigna species

YJ Kang, SK Kim, MY Kim, P Lestari, KH Kim… - Nature …, 2014 - nature.com
Mungbean (Vigna radiata) is a fast-growing, warm-season legume crop that is primarily
cultivated in develo** countries of Asia. Here we construct a draft genome sequence of …

The sea lamprey germline genome provides insights into programmed genome rearrangement and vertebrate evolution

JJ Smith, N Timoshevskaya, C Ye, C Holt, MC Keinath… - Nature …, 2018 - nature.com
The sea lamprey (Petromyzon marinus) serves as a comparative model for reconstructing
vertebrate evolution. To enable more informed analyses, we developed a new assembly of …

CELLO2GO: a web server for protein subCELlular LOcalization prediction with functional gene ontology annotation

CS Yu, CW Cheng, WC Su, KC Chang, SW Huang… - PloS one, 2014 - journals.plos.org
CELLO2GO (http://cello. life. nctu. edu. tw/cello2go/) is a publicly available, web-based
system for screening various properties of a targeted protein and its subcellular localization …

Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype

O Jaillon, JM Aury, F Brunet, JL Petit… - Nature, 2004 - nature.com
Tetraodon nigroviridis is a freshwater puffer fish with the smallest known vertebrate genome.
Here, we report a draft genome sequence with long-range linkage and substantial …

Genome-wide analysis of the MYB transcription factor superfamily in soybean

H Du, SS Yang, Z Liang, BR Feng, L Liu, YB Huang… - BMC plant biology, 2012 - Springer
Background The MYB superfamily constitutes one of the most abundant groups of
transcription factors described in plants. Nevertheless, their functions appear to be highly …

The Draft Genome of Ciona intestinalis: Insights into Chordate and Vertebrate Origins

P Dehal, Y Satou, RK Campbell, J Chapman… - Science, 2002 - science.org
The first chordates appear in the fossil record at the time of the Cambrian explosion, nearly
550 million years ago. The modern ascidian tadpole represents a plausible approximation to …

The unfoldomics decade: an update on intrinsically disordered proteins

AK Dunker, CJ Oldfield, J Meng, P Romero, JY Yang… - BMC genomics, 2008 - Springer
Background Our first predictor of protein disorder was published just over a decade ago in
the Proceedings of the IEEE International Conference on Neural Networks (Romero P …

Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire

CA Lévesque, H Brouwer, L Cano, JP Hamilton, C Holt… - Genome biology, 2010 - Springer
Background Pythium ultimum is a ubiquitous oomycete plant pathogen responsible for a
variety of diseases on a broad range of crop and ornamental species. Results The P …