Self-driving laboratories for chemistry and materials science

G Tom, SP Schmid, SG Baird, Y Cao, K Darvish… - Chemical …, 2024 - ACS Publications
Self-driving laboratories (SDLs) promise an accelerated application of the scientific method.
Through the automation of experimental workflows, along with autonomous experimental …

Deep learning in chemistry

AC Mater, ML Coote - Journal of chemical information and …, 2019 - ACS Publications
Machine learning enables computers to address problems by learning from data. Deep
learning is a type of machine learning that uses a hierarchical recombination of features to …

E (n) equivariant graph neural networks

VG Satorras, E Hoogeboom… - … conference on machine …, 2021 - proceedings.mlr.press
This paper introduces a new model to learn graph neural networks equivariant to rotations,
translations, reflections and permutations called E (n)-Equivariant Graph Neural Networks …

Atomistic line graph neural network for improved materials property predictions

K Choudhary, B DeCost - npj Computational Materials, 2021 - nature.com
Graph neural networks (GNN) have been shown to provide substantial performance
improvements for atomistic material representation and modeling compared with descriptor …

Artificial intelligence‐based data‐driven strategy to accelerate research, development, and clinical trials of COVID vaccine

A Sharma, T Virmani, V Pathak… - BioMed research …, 2022 - Wiley Online Library
The global COVID‐19 (coronavirus disease 2019) pandemic, which was caused by the
severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2), has resulted in a …

Predicting drug–target interaction using a novel graph neural network with 3D structure-embedded graph representation

J Lim, S Ryu, K Park, YJ Choe, J Ham… - Journal of chemical …, 2019 - ACS Publications
We propose a novel deep learning approach for predicting drug–target interaction using a
graph neural network. We introduce a distance-aware graph attention algorithm to …

Application advances of deep learning methods for de novo drug design and molecular dynamics simulation

Q Bai, S Liu, Y Tian, T Xu… - Wiley …, 2022 - Wiley Online Library
De novo drug design is a stationary way to build novel ligands in the confined pocket of
receptor by assembling the atoms or fragments, while molecular dynamics (MD) simulation …

Integrated molecular modeling and machine learning for drug design

S **a, E Chen, Y Zhang - Journal of chemical theory and …, 2023 - ACS Publications
Modern therapeutic development often involves several stages that are interconnected, and
multiple iterations are usually required to bring a new drug to the market. Computational …

A structure-based platform for predicting chemical reactivity

F Sandfort, F Strieth-Kalthoff, M Kühnemund, C Beecks… - Chem, 2020 - cell.com
Despite their enormous potential, machine learning methods have only found limited
application in predicting reaction outcomes, because current models are often highly …

Entangled conditional adversarial autoencoder for de novo drug discovery

D Polykovskiy, A Zhebrak, D Vetrov… - Molecular …, 2018 - ACS Publications
Modern computational approaches and machine learning techniques accelerate the
invention of new drugs. Generative models can discover novel molecular structures within …