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[HTML][HTML] Nature, nurture, or chance: stochastic gene expression and its consequences
Gene expression is a fundamentally stochastic process, with randomness in transcription
and translation leading to cell-to-cell variations in mRNA and protein levels. This variation …
and translation leading to cell-to-cell variations in mRNA and protein levels. This variation …
The second wave of synthetic biology: from modules to systems
PEM Purnick, R Weiss - Nature reviews Molecular cell biology, 2009 - nature.com
Synthetic biology is a research field that combines the investigative nature of biology with
the constructive nature of engineering. Efforts in synthetic biology have largely focused on …
the constructive nature of engineering. Efforts in synthetic biology have largely focused on …
Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters
Despite extensive research, our understanding of the rules according to which cis-regulatory
sequences are converted into gene expression is limited. We devised a method for …
sequences are converted into gene expression is limited. We devised a method for …
Bistability, epigenetics, and bet-hedging in bacteria
Clonal populations of microbial cells often show a high degree of phenotypic variability
under homogeneous conditions. Stochastic fluctuations in the cellular components that …
under homogeneous conditions. Stochastic fluctuations in the cellular components that …
[HTML][HTML] A synthetic biology framework for programming eukaryotic transcription functions
Eukaryotic transcription factors (TFs) perform complex and combinatorial functions within
transcriptional networks. Here, we present a synthetic framework for systematically …
transcriptional networks. Here, we present a synthetic framework for systematically …
Promoter engineering: recent advances in controlling transcription at the most fundamental level
Synthetic control of gene expression is critical for metabolic engineering efforts. Specifically,
precise control of key pathway enzymes (heterologous or native) can help maximize product …
precise control of key pathway enzymes (heterologous or native) can help maximize product …
Controlling promoter strength and regulation in Saccharomyces cerevisiae using synthetic hybrid promoters
A dynamic range of well‐controlled constitutive and tunable promoters are essential for
metabolic engineering and synthetic biology applications in all host organisms. Here, we …
metabolic engineering and synthetic biology applications in all host organisms. Here, we …
Diversity-based, model-guided construction of synthetic gene networks with predicted functions
Engineering artificial gene networks from modular components is a major goal of synthetic
biology. However, the construction of gene networks with predictable functions remains …
biology. However, the construction of gene networks with predictable functions remains …
Introduction and expression of genes for metabolic engineering applications in Saccharomyces cerevisiae
NA Da Silva, S Srikrishnan - FEMS yeast research, 2012 - academic.oup.com
Metabolic pathway engineering in the yeast Saccharomyces cerevisiae leads to improved
production of a wide range of compounds, ranging from ethanol (from biomass) to natural …
production of a wide range of compounds, ranging from ethanol (from biomass) to natural …
The role of physiological heterogeneity in microbial population behavior
As the ability to analyze individual cells in microbial populations expands, it is becoming
apparent that isogenic microbial populations contain substantial cell-to-cell differences in …
apparent that isogenic microbial populations contain substantial cell-to-cell differences in …