[HTML][HTML] Self-training: A survey

MR Amini, V Feofanov, L Pauletto, L Hadjadj… - Neurocomputing, 2025 - Elsevier
Self-training methods have gained significant attention in recent years due to their
effectiveness in leveraging small labeled datasets and large unlabeled observations for …

Advances and perspectives in discovery and functional analysis of small secreted proteins in plants

XL Hu, H Lu, MM Hassan, J Zhang, G Yuan… - Horticulture …, 2021 - academic.oup.com
Small secreted proteins (SSPs) are less than 250 amino acids in length and are actively
transported out of cells through conventional protein secretion pathways or unconventional …

[HTML][HTML] Multi-Omics Approaches in Oil Palm Research: A Comprehensive Review of Metabolomics, Proteomics, and Transcriptomics Based on Low-Temperature …

JJ John Martin, Y Song, M Hou, L Zhou, X Liu… - International Journal of …, 2024 - mdpi.com
Oil palm (Elaeis guineensis Jacq.) is a typical tropical oil crop with a temperature of 26–28°
C, providing approximately 35% of the total world's vegetable oil. Growth and productivity …

The chromosome-scale genome assembly of cluster bean provides molecular insight into edible gum (galactomannan) biosynthesis family genes

K Gaikwad, G Ramakrishna, H Srivastava, S Saxena… - Scientific Reports, 2023 - nature.com
Cluster bean (Cyamopsis tetragonoloba (L.) Taub 2n= 14, is commonly known as Guar.
Apart from being a vegetable crop, it is an abundant source of a natural hetero …

Long-read annotation: automated eukaryotic genome annotation based on long-read cDNA sequencing

DE Cook, JE Valle-Inclan, A Pajoro… - Plant …, 2019 - academic.oup.com
Single-molecule full-length complementary DNA (cDNA) sequencing can aid genome
annotation by revealing transcript structure and alternative splice forms, yet current …

TransPi—a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly

RE Rivera‐Vicéns, CA Garcia‐Escudero… - Molecular Ecology …, 2022 - Wiley Online Library
The use of RNA sequencing (RNA‐Seq) data and the generation of de novo transcriptome
assemblies have been pivotal for studies in ecology and evolution. This is especially true for …

Assembly and annotation of the nuclear and organellar genomes of a dwarf coconut (Chowghat Green Dwarf) possessing enhanced disease resistance

RK Muliyar, P Chowdappa, SK Behera… - OMICS: A Journal of …, 2020 - liebertpub.com
Coconut (Cocos nucifera L.), an important source of vegetable oil, nutraceuticals, functional
foods, and housing materials, provides raw materials for a repertoire of industries engaged …

[HTML][HTML] Multi-omics approaches and resources for systems-level gene function prediction in the plant kingdom

MR Abdullah-Zawawi, N Govender, S Harun… - Plants, 2022 - mdpi.com
In higher plants, the complexity of a system and the components within and among species
are rapidly dissected by omics technologies. Multi-omics datasets are integrated to infer and …

Focused identification of germplasm strategy (FIGS): a strategic approach for trait-enhanced pre-breeding

NC Sunitha, MD Prathibha, R Thribhuvan… - Genetic Resources and …, 2024 - Springer
Genebanks maintain a rich source of variation for resistance against many pests and
diseases and tolerance to abiotic stresses. However, identifying appropriate germplasm …

Genomic Analysis of the Insect-Killing Fungus Beauveria bassiana JEF-007 as a Biopesticide

SJ Lee, MR Lee, S Kim, JC Kim, SE Park, D Li… - Scientific reports, 2018 - nature.com
Insect-killing fungi have high potential in pest management. A deeper insight into the fungal
genes at the whole genome level is necessary to understand the inter-species or intra …