Flavin-Based Electron Bifurcation, Ferredoxin, Flavodoxin, and Anaerobic Respiration With Protons (Ech) or NAD+ (Rnf) as Electron Acceptors: A Historical Review

W Buckel, RK Thauer - Frontiers in microbiology, 2018 - frontiersin.org
Flavin-based electron bifurcation is a newly discovered mechanism, by which a hydride
electron pair from NAD (P) H, coenzyme F420H2, H2, or formate is split by flavoproteins into …

Microbial degradation of phthalates: biochemistry and environmental implications

M Boll, R Geiger, M Junghare… - Environmental …, 2020 - Wiley Online Library
The environmentally relevant xenobiotic esters of phthalic acid (PA), isophthalic acid (IPA)
and terephthalic acid (TPA) are produced on a million ton scale annually and are …

Isolation of an archaeon at the prokaryote–eukaryote interface

H Imachi, MK Nobu, N Nakahara, Y Morono… - Nature, 2020 - nature.com
The origin of eukaryotes remains unclear,,–. Current data suggest that eukaryotes may have
emerged from an archaeal lineage known as 'Asgard'archaea,. Despite the eukaryote-like …

MiDAS 5: Global diversity of bacteria and archaea in anaerobic digesters

MKD Dueholm, KS Andersen, AKC Korntved… - Nature …, 2024 - nature.com
Anaerobic digestion of organic waste into methane and carbon dioxide (biogas) is carried
out by complex microbial communities. Here, we use full-length 16S rRNA gene sequencing …

Microbial dark matter ecogenomics reveals complex synergistic networks in a methanogenic bioreactor

MK Nobu, T Narihiro, C Rinke, Y Kamagata… - The ISME …, 2015 - academic.oup.com
Ecogenomic investigation of a methanogenic bioreactor degrading terephthalate (TA)
allowed elucidation of complex synergistic networks of uncultivated microorganisms …

The nexus of syntrophy‐associated microbiota in anaerobic digestion revealed by long‐term enrichment and community survey

T Narihiro, MK Nobu, NK Kim… - Environmental …, 2015 - Wiley Online Library
Anaerobic digestion (AD) processes are known to effectively convert organic waste to CO 2
and CH 4, but much of the microbial ecology remains unclear. Specifically, we have limited …

High-rate cotreatment of purified terephthalate and dimethyl terephthalate manufacturing wastewater by a mesophilic upflow anaerobic sludge blanket reactor and the …

K Kuroda, T Narihiro, F Shinshima, M Yoshida… - Water research, 2022 - Elsevier
Polyethylene terephthalate (PET) is produced worldwide, mainly as material for plastic drink
bottles. PET is produced by polymerization of purified terephthalate (PTA) or dimethyl …

Genome-resolved metagenomic analysis reveals roles for candidate phyla and other microbial community members in biogeochemical transformations in oil …

P Hu, L Tom, A Singh, BC Thomas, BJ Baker… - MBio, 2016 - journals.asm.org
Oil reservoirs are major sites of methane production and carbon turnover, processes with
significant impacts on energy resources and global biogeochemical cycles. We applied a …

Phylogeny and physiology of candidate phylum 'Atribacteria'(OP9/JS1) inferred from cultivation-independent genomics

MK Nobu, JA Dodsworth, SK Murugapiran… - The ISME …, 2016 - academic.oup.com
The 'Atribacteria'is a candidate phylum in the Bacteria recently proposed to include
members of the OP9 and JS1 lineages. OP9 and JS1 are globally distributed, and in some …

Aerobic and anaerobic iron oxidizers together drive denitrification and carbon cycling at marine iron-rich hydrothermal vents

SM McAllister, R Vandzura, JL Keffer… - The ISME …, 2021 - academic.oup.com
In principle, iron oxidation can fuel significant primary productivity and nutrient cycling in
dark environments such as the deep sea. However, we have an extremely limited …