Genome projects in invasion biology

MA McCartney, S Mallez, DM Gohl - Conservation Genetics, 2019 - Springer
Advances in sequencing and informatics and rapidly falling costs have made genome
sequencing projects far more accessible to researchers in all of the life sciences, including …

Comparative genomics and genome-wide SNPs of endangered Eld's deer provide breeder selection for inbreeding avoidance

V Pumpitakkul, W Chetruengchai, C Srichomthong… - Scientific Reports, 2023 - nature.com
Eld's deer, a conserved wildlife species of Thailand, is facing inbreeding depression,
particularly in the captive Siamese Eld's deer (SED) subspecies. In this study, we …

Analysis of muntjac deer genome and chromatin architecture reveals rapid karyotype evolution

AB Mudd, JV Bredeson, R Baum… - Communications …, 2020 - nature.com
Closely related muntjac deer show striking karyotype differences. Here we describe
chromosome-scale genome assemblies for Chinese and Indian muntjacs, Muntiacus …

Current sika deer effective population size is near to reaching its historically highest level in the Japanese archipelago by release from hunting rather than climate …

H Iijima, J Nagata, A Izuno, K Uchiyama… - The …, 2023 - journals.sagepub.com
Deer species were repeatedly overexploited and protected for their meat and fur and they
had strong impacts on ecosystems and human society by damaging crops and planted …

[HTML][HTML] Genomic insights into ruminant evolution: from past to future prospects

W Bao, C Lei, W Wen - Zoological Research, 2019 - ncbi.nlm.nih.gov
Ruminants (Ruminantia) are among the most successful herbivorous mammals, exhibiting
wide-ranging morphological and ecological characteristics (such as headgear and …

An evolutionary insertion in the Mxra8 receptor-binding site confers resistance to alphavirus infection and pathogenesis

AS Kim, O Zimmerman, JM Fox, CA Nelson, K Basore… - Cell host & …, 2020 - cell.com
Alphaviruses are emerging, mosquito-transmitted RNA viruses with poorly understood
cellular tropism and species selectivity. Mxra8 is a receptor for multiple alphaviruses …

New insights into mammalian sex chromosome structure and evolution using high-quality sequences from bovine X and Y chromosomes

R Liu, WY Low, R Tearle, S Koren, J Ghurye, A Rhie… - BMC genomics, 2019 - Springer
Background Mammalian X chromosomes are mainly euchromatic with a similar size and
structure among species whereas Y chromosomes are smaller, have undergone substantial …

Chromosome-level assembly of the Rangifer tarandus genome and validation of cervid and bovid evolution insights

W Poisson, J Prunier, A Carrier, I Gilbert… - BMC genomics, 2023 - Springer
Background Genome assembly into chromosomes facilitates several analyses including
cytogenetics, genomics and phylogenetics. Despite rapid development in bioinformatics …

Transcriptomic analysis of different tissue layers in antler growth Center in Sika Deer (Cervus nippon)

H Ba, D Wang, TO Yau, Y Shang, C Li - BMC genomics, 2019 - Springer
Background With the unprecedented rapid growth rate (up to 2.75 cm/day), velvet antler is
an invaluable model for the identification of potent growth factors and signaling networks for …

The first high-quality reference genome of sika deer provides insights into high-tannin adaptation

X **ng, C Ai, T Wang, Y Li, H Liu, P Hu… - Genomics …, 2023 - academic.oup.com
Sika deer are known to prefer oak leaves, which are rich in tannins and toxic to most
mammals; however, the genetic mechanisms underlying their unique ability to adapt to living …