The role of filaggrin in atopic dermatitis and allergic disease

C Drislane, AD Irvine - Annals of Allergy, Asthma & Immunology, 2020 - Elsevier
Objective To provide an overview of filaggrin biology and the role of filaggrin variants in
atopic dermatitis (AD) and allergic disease. Data Sources We performed a PubMed literature …

[HTML][HTML] Leishmania infections: Molecular targets and diagnosis

M Akhoundi, T Downing, J Votýpka, K Kuhls… - Molecular aspects of …, 2017 - Elsevier
Progress in the diagnosis of leishmaniases depends on the development of effective
methods and the discovery of suitable biomarkers. We propose firstly an update …

TASSEL-GBS: a high capacity genoty** by sequencing analysis pipeline

JC Glaubitz, TM Casstevens, F Lu, J Harriman… - PloS one, 2014 - journals.plos.org
Genoty** by sequencing (GBS) is a next generation sequencing based method that takes
advantage of reduced representation to enable high throughput genoty** of large …

Robust demographic inference from genomic and SNP data

L Excoffier, I Dupanloup, E Huerta-Sánchez… - PLoS …, 2013 - journals.plos.org
We introduce a flexible and robust simulation-based framework to infer demographic
parameters from the site frequency spectrum (SFS) computed on large genomic datasets …

Estimating and interpreting FST: the impact of rare variants

G Bhatia, N Patterson, S Sankararaman… - Genome …, 2013 - genome.cshlp.org
In a pair of seminal papers, Sewall Wright and Gustave Malécot introduced F ST as a
measure of structure in natural populations. In the decades that followed, a number of …

Testing for ancient admixture between closely related populations

EY Durand, N Patterson, D Reich… - Molecular biology and …, 2011 - academic.oup.com
One enduring question in evolutionary biology is the extent of archaic admixture in the
genomes of present-day populations. In this paper, we present a test for ancient admixture …

Detecting natural selection in genomic data

JJ Vitti, SR Grossman, PC Sabeti - Annual review of genetics, 2013 - annualreviews.org
The past fifty years have seen the development and application of numerous statistical
methods to identify genomic regions that appear to be shaped by natural selection. These …

2b-RAD: a simple and flexible method for genome-wide genoty**

S Wang, E Meyer, JK McKay, MV Matz - Nature methods, 2012 - nature.com
We describe 2b-RAD, a streamlined restriction site–associated DNA (RAD) genoty**
method based on sequencing the uniform fragments produced by type IIB restriction …

Comprehensive genoty** of the USA national maize inbred seed bank

MC Romay, MJ Millard, JC Glaubitz, JA Peiffer… - Genome biology, 2013 - Springer
Background Genoty** by sequencing, a new low-cost, high-throughput sequencing
technology was used to genotype 2,815 maize inbred accessions, preserved mostly at the …

Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data

RN Gutenkunst, RD Hernandez, SH Williamson… - PLoS …, 2009 - journals.plos.org
Demographic models built from genetic data play important roles in illuminating prehistorical
events and serving as null models in genome scans for selection. We introduce an inference …