Strategies to overcome the challenges of low or no expression of heterologous proteins in Escherichia coli
R Jiang, S Yuan, Y Zhou, Y Wei, F Li, M Wang… - Biotechnology …, 2024 - Elsevier
Protein expression is a critical process in diverse biological systems. For Escherichia coli, a
widely employed microbial host in industrial catalysis and healthcare, researchers often face …
widely employed microbial host in industrial catalysis and healthcare, researchers often face …
Metabolic responses to recombinant bioprocesses in Escherichia coli
Escherichia coli has been widely used for the production of recombinant proteins. However,
the unbalances between host metabolism and recombinant biosynthesis continue to hamper …
the unbalances between host metabolism and recombinant biosynthesis continue to hamper …
Codon optimization with deep learning to enhance protein expression
H Fu, Y Liang, X Zhong, ZL Pan, L Huang, HL Zhang… - Scientific reports, 2020 - nature.com
Heterologous expression is the main approach for recombinant protein production ingenetic
synthesis, for which codon optimization is necessary. The existing optimization methods are …
synthesis, for which codon optimization is necessary. The existing optimization methods are …
Efficient mAb production in CHO cells with optimized signal peptide, codon, and UTR
M You, Y Yang, C Zhong, F Chen, X Wang, T Jia… - Applied microbiology …, 2018 - Springer
Antibody drugs have been used to treat a number of diseases successfully. Producing
antibodies with high yield and quality is necessary for clinical applications of antibodies. For …
antibodies with high yield and quality is necessary for clinical applications of antibodies. For …
A detailed comparative analysis on the overall codon usage pattern in herpesviruses
S RoyChoudhury, D Mukherjee - Virus Research, 2010 - Elsevier
Herpesviruses infect a wide range of organisms including humans. Some of these viruses
are potential gene transfer vectors for gene therapy. However no study has been reported …
are potential gene transfer vectors for gene therapy. However no study has been reported …
Evolution of synonymous codon usage bias in west African and central African strains of monkeypox virus
The evolution of bias in synonymous codon usage in chosen monkeypox viral genomes and
the factors influencing its diversification have not been reported so far. In this study, various …
the factors influencing its diversification have not been reported so far. In this study, various …
“CodonWizard”–An intuitive software tool with graphical user interface for customizable codon optimization in protein expression efforts
P Rehbein, J Berz, P Kreisel, H Schwalbe - Protein Expression and …, 2019 - Elsevier
Optimization of coding sequences to maximize protein expression yield is often outsourced
to external service providers during commercial gene synthesis and thus unfortunately …
to external service providers during commercial gene synthesis and thus unfortunately …
Bacterial expression of Crimean-Congo hemorrhagic fever virus nucleoprotein and its evaluation as a diagnostic reagent in an indirect ELISA
RR Samudzi, PA Leman, JT Paweska… - Journal of virological …, 2012 - Elsevier
Crimean-Congo hemorrhagic fever virus (CCHFV) is a tick-borne viral zoonosis distributed
widely in Africa, Asia, Russia and the Balkans. The emergence and re-emergence of …
widely in Africa, Asia, Russia and the Balkans. The emergence and re-emergence of …
Ligand and structure-based approaches for the identification of peptide deformylase inhibitors as antibacterial drugs
J Gao, L Liang, Y Zhu, S Qiu, T Wang… - International Journal of …, 2016 - mdpi.com
Peptide deformylase (PDF) is a metalloprotease catalyzing the removal of a formyl group
from newly synthesized proteins, which makes it an important antibacterial drug target …
from newly synthesized proteins, which makes it an important antibacterial drug target …
gtAI: an improved species-specific tRNA adaptation index using the genetic algorithm
The tRNA adaptation index (tAI) is a translation efficiency metric that considers weighted
values (S ij values) for codon–tRNA wobble interaction efficiencies. The initial …
values (S ij values) for codon–tRNA wobble interaction efficiencies. The initial …