From hairballs to hypotheses–biological insights from microbial networks

L Röttjers, K Faust - FEMS microbiology reviews, 2018 - academic.oup.com
Microbial networks are an increasingly popular tool to investigate microbial community
structure, as they integrate multiple types of information and may represent systems-level …

Assortativity in complex networks

R Noldus, P Van Mieghem - Journal of Complex Networks, 2015 - academic.oup.com
We survey the concept of assortativity, starting from its original definition by Newman in
2002. Degree assortativity is the most commonly used form of assortativity. Degree …

Modelling transmission and control of the COVID-19 pandemic in Australia

SL Chang, N Harding, C Zachreson, OM Cliff… - Nature …, 2020 - nature.com
There is a continuing debate on relative benefits of various mitigation and suppression
strategies aimed to control the spread of COVID-19. Here we report the results of agent …

Percolation centrality: Quantifying graph-theoretic impact of nodes during percolation in networks

M Piraveenan, M Prokopenko, L Hossain - PloS one, 2013 - journals.plos.org
A number of centrality measures are available to determine the relative importance of a
node in a complex network, and betweenness is prominent among them. However, the …

Investigating spatiotemporal dynamics and synchrony of influenza epidemics in Australia: an agent-based modelling approach

OM Cliff, N Harding, M Piraveenan, EY Erten… - … Modelling Practice and …, 2018 - Elsevier
In this paper we present Ace Mod, an agent-based modelling framework for studying
influenza epidemics in Australia. The simulator is designed to analyse the spatiotemporal …

Portfolio optimization through a network approach: Network assortative mixing and portfolio diversification

F Ricca, A Scozzari - European Journal of Operational Research, 2024 - Elsevier
The paper deals with the classical problem of selecting a portfolio in the financial market and
follows a risk-return optimization approach. The main issue in portfolio selection is capturing …

Diagnosis of autism spectrum disorder based on eigenvalues of brain networks

S Mostafa, L Tang, FX Wu - Ieee Access, 2019 - ieeexplore.ieee.org
Autism spectrum disorder (ASD) is a neuro dysfunction which causes the repetitive behavior
and social instability of patients. Diagnosing ASD has been of great interest. However, due …

Synaptic reorganization of synchronized neuronal networks with synaptic weight and structural plasticity

K Chauhan, AB Neiman, PA Tass - PLoS Computational Biology, 2024 - journals.plos.org
Abnormally strong neural synchronization may impair brain function, as observed in several
brain disorders. We computationally study how neuronal dynamics, synaptic weights, and …

Affinity paths and information diffusion in social networks

JL Iribarren, E Moro - Social networks, 2011 - Elsevier
Widespread interest in the diffusion of information through social networks has produced a
large number of Social Dynamics models. A majority of them use theoretical hypothesis to …

Extracting biomarkers of autism from MEG resting-state functional connectivity networks

V Tsiaras, PG Simos, R Rezaie, BR Sheth… - Computers in biology …, 2011 - Elsevier
The present study is a preliminary attempt to use graph theory for deriving distinct features of
resting-state functional networks in young adults with autism spectrum disorder (ASD) …