Proteobacteria: microbial signature of dysbiosis in gut microbiota
Recent advances in sequencing techniques, applied to the study of microbial communities,
have provided compelling evidence that the mammalian intestinal tract harbors a complex …
have provided compelling evidence that the mammalian intestinal tract harbors a complex …
Zooming in on the phycosphere: the ecological interface for phytoplankton–bacteria relationships
By controlling nutrient cycling and biomass production at the base of the food web,
interactions between phytoplankton and bacteria represent a fundamental ecological …
interactions between phytoplankton and bacteria represent a fundamental ecological …
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
A Klindworth, E Pruesse, T Schweer… - Nucleic acids …, 2013 - academic.oup.com
Abstract 16S ribosomal RNA gene (rDNA) amplicon analysis remains the standard
approach for the cultivation-independent investigation of microbial diversity. The accuracy of …
approach for the cultivation-independent investigation of microbial diversity. The accuracy of …
Microbial surface colonization and biofilm development in marine environments
H Dang, CR Lovell - Microbiology and molecular biology reviews, 2016 - Am Soc Microbiol
Biotic and abiotic surfaces in marine waters are rapidly colonized by microorganisms.
Surface colonization and subsequent biofilm formation and development provide numerous …
Surface colonization and subsequent biofilm formation and development provide numerous …
Master recyclers: features and functions of bacteria associated with phytoplankton blooms
Marine phytoplankton blooms are annual spring events that sustain active and diverse
bloom-associated bacterial populations. Blooms vary considerably in terms of eukaryotic …
bloom-associated bacterial populations. Blooms vary considerably in terms of eukaryotic …
Fundamentals of microbial community resistance and resilience
Microbial communities are at the heart of all ecosystems, and yet microbial community
behavior in disturbed environments remains difficult to measure and predict. Understanding …
behavior in disturbed environments remains difficult to measure and predict. Understanding …
Tax4Fun2: prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene sequences
Abstract Background Sequencing of 16S rRNA genes has become a powerful technique to
study microbial communities and their responses towards changing environmental …
study microbial communities and their responses towards changing environmental …
Microbial metabolites in the marine carbon cycle
One-quarter of photosynthesis-derived carbon on Earth rapidly cycles through a set of short-
lived seawater metabolites that are generated from the activities of marine phytoplankton …
lived seawater metabolites that are generated from the activities of marine phytoplankton …
Polysaccharide degradation by the Bacteroidetes: mechanisms and nomenclature
The Bacteroidetes phylum is renowned for its ability to degrade a wide range of complex
carbohydrates, a trait that has enabled its dominance in many diverse environments. The …
carbohydrates, a trait that has enabled its dominance in many diverse environments. The …
Marine microbial community dynamics and their ecological interpretation
Recent advances in studying the dynamics of marine microbial communities have shown
that the composition of these communities follows predictable patterns and involves complex …
that the composition of these communities follows predictable patterns and involves complex …