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A review on nonlinear DNA physics
The study and the investigation of structural and dynamical properties of complex systems
have attracted considerable interest among scientists in general and physicists and …
have attracted considerable interest among scientists in general and physicists and …
Helicoidal Peyrard–Bishop model of DNA dynamics
S Zdravković - Journal of Nonlinear Mathematical Physics, 2011 - Taylor & Francis
A nonlinear model describing DNA dynamics, called helicoidal Peyrard–Bishop model, is
described. It is shown that the model can explain a local opening of a DNA helix during …
described. It is shown that the model can explain a local opening of a DNA helix during …
Soliton excitations and shape-changing collisions in alpha helical proteins with interspine coupling at higher order
X Lü, F Lin - Communications in Nonlinear Science and Numerical …, 2016 - Elsevier
Based on the Lax representation, we solve the three coupled higher order nonlinear
Schrödinger equations with the achievement of N-soliton solution formula, by means of …
Schrödinger equations with the achievement of N-soliton solution formula, by means of …
[HTML][HTML] Propagation of the ordinary and extraordinary modulated optical pulses in a nonlinear Kerr-type birefringent optical waveguide: Analytical description
HY Donkeng, WK Mabou, MBP Mbiesset… - Results in Optics, 2023 - Elsevier
The purpose of this work is to describe theoretically the behavior of modulated pulses in
nonlinear birefringent optical waveguides and particularly in the optical fibers, by taking into …
nonlinear birefringent optical waveguides and particularly in the optical fibers, by taking into …
Parameter selection in a Peyrard–Bishop–Dauxois model for DNA dynamics
In this Letter we study possible intervals for some parameters existing in the Peyrard–Bishop–
Dauxois (PBD) model for the DNA dynamics. These parameters describe longitudinal and …
Dauxois (PBD) model for the DNA dynamics. These parameters describe longitudinal and …
Whitham modulation theory and periodic solutions for the fifth-order nonlinear Schrödinger equation in the Heisenberg ferromagnetic spin chain
Y Zhang, HQ Hao - Nonlinear Dynamics, 2023 - Springer
In this paper, we investigate the periodic solutions and Whitham modulation theory for the
fifth-order nonlinear Schrödinger equation, which can describe the one-dimensional …
fifth-order nonlinear Schrödinger equation, which can describe the one-dimensional …
Localized modulated waves in microtubules
S Zdravković, AN Bugay, GF Aru… - … Interdisciplinary Journal of …, 2014 - pubs.aip.org
In the present paper, we study nonlinear dynamics of microtubules (MTs). As an analytical
method, we use semi-discrete approximation and show that localized modulated solitonic …
method, we use semi-discrete approximation and show that localized modulated solitonic …
Modulational instability and exact soliton solutions for a twist-opening model of DNA dynamics
We study the nonlinear dynamics of DNA which takes into account the twist-opening
interactions due to the helicoidal molecular geometry. The small amplitude dynamics of the …
interactions due to the helicoidal molecular geometry. The small amplitude dynamics of the …
Fractional nonlinear dynamics of DNA breathing
The classical Lagrangian formulation for the nonlinear dynamics of a homogeneous Peyrard–
Bishop DNA molecular chain is reviewed and extended to include coordinates with time …
Bishop DNA molecular chain is reviewed and extended to include coordinates with time …
Localized modulated waves and longitudinal model of microtubules
S Zdravković, S Zeković, AN Bugay… - Applied Mathematics and …, 2016 - Elsevier
We here study nonlinear dynamics of microtubule (MT). A so-called u-model is explained in
detail. A single longitudinal degree of freedom per MT subunits is assumed. It is known that …
detail. A single longitudinal degree of freedom per MT subunits is assumed. It is known that …