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Industrial biotechnology of Pseudomonas putida: advances and prospects
Pseudomonas putida is a Gram-negative, rod-shaped bacterium that can be encountered in
diverse ecological habitats. This ubiquity is traced to its remarkably versatile metabolism …
diverse ecological habitats. This ubiquity is traced to its remarkably versatile metabolism …
Synthetic biology of extremophiles: a new wave of biomanufacturing
JW Ye, YN Lin, XQ Yi, ZX Yu, X Liu, GQ Chen - Trends in Biotechnology, 2023 - cell.com
Microbial biomanufacturing, powered by the advances of synthetic biology, has attracted
growing interest for the production of diverse products. In contrast to conventional microbes …
growing interest for the production of diverse products. In contrast to conventional microbes …
Cofunctioning of bacterial exometabolites drives root microbiota establishment
Soil-dwelling microbes are the principal inoculum for the root microbiota, but our
understanding of microbe–microbe interactions in microbiota establishment remains …
understanding of microbe–microbe interactions in microbiota establishment remains …
SEVA 4.0: an update of the Standard European Vector Architecture database for advanced analysis and programming of bacterial phenotypes
Abstract The SEVA platform (https://seva-plasmids. com) was launched one decade ago,
both as a database (DB) and as a physical repository of plasmid vectors for genetic analysis …
both as a database (DB) and as a physical repository of plasmid vectors for genetic analysis …
A versatile active learning workflow for optimization of genetic and metabolic networks
Optimization of biological networks is often limited by wet lab labor and cost, and the lack of
convenient computational tools. Here, we describe METIS, a versatile active machine …
convenient computational tools. Here, we describe METIS, a versatile active machine …
Metabolic engineering of Cupriavidus necator H16 for sustainable biofuels from CO2
Decelerating global warming is one of the predominant challenges of our time and will
require conversion of CO 2 to usable products and commodity chemicals. Of particular …
require conversion of CO 2 to usable products and commodity chemicals. Of particular …
Type III secretion system effectors form robust and flexible intracellular virulence networks
Infections with many Gram-negative pathogens, including Escherichia coli, Salmonella,
Shigella, and Yersinia, rely on type III secretion system (T3SS) effectors. We hypothesized …
Shigella, and Yersinia, rely on type III secretion system (T3SS) effectors. We hypothesized …
[HTML][HTML] A navigation guide of synthetic biology tools for Pseudomonas putida
Pseudomonas putida is a microbial chassis of huge potential for industrial and
environmental biotechnology, owing to its remarkable metabolic versatility and ability to …
environmental biotechnology, owing to its remarkable metabolic versatility and ability to …
Towards robust Pseudomonas cell factories to harbour novel biosynthetic pathways
NL Bitzenhofer, L Kruse, S Thies… - Essays in …, 2021 - portlandpress.com
Biotechnological production in bacteria enables access to numerous valuable chemical
compounds. Nowadays, advanced molecular genetic toolsets, enzyme engineering as well …
compounds. Nowadays, advanced molecular genetic toolsets, enzyme engineering as well …
Halomonas as a chassis
JW Ye, GQ Chen - Essays in Biochemistry, 2021 - portlandpress.com
With the rapid development of systems and synthetic biology, the non-model bacteria,
Halomonas spp., have been developed recently to become a cost-competitive platform for …
Halomonas spp., have been developed recently to become a cost-competitive platform for …