Performance and application of 16S rRNA gene cycle sequencing for routine identification of bacteria in the clinical microbiology laboratory
DL Church, L Cerutti, A Gürtler, T Griener… - Clinical microbiology …, 2020 - Am Soc Microbiol
This review provides a state-of-the-art description of the performance of Sanger cycle
sequencing of the 16S rRNA gene for routine identification of bacteria in the clinical …
sequencing of the 16S rRNA gene for routine identification of bacteria in the clinical …
Degradation of cellulose and hemicellulose by ruminal microorganisms
PJ Weimer - Microorganisms, 2022 - mdpi.com
As major structural components of plant cell walls, cellulose and hemicellulose are
degraded and fermented by anaerobic microbes in the rumen to produce volatile fatty acids …
degraded and fermented by anaerobic microbes in the rumen to produce volatile fatty acids …
Valid publication of the names of forty-two phyla of prokaryotes
After the International Committee on Systematics of Prokaryotes (ICSP) had voted to include
the rank of phylum in the rules of the International Code of Nomenclature of Prokaryotes …
the rank of phylum in the rules of the International Code of Nomenclature of Prokaryotes …
Phylogenomic analyses of the Staphylococcaceae family suggest the reclassification of five species within the genus Staphylococcus as heterotypic synonyms, the promotion of five subspecies to novel species …
Phylogenetic analyses based on 16S rRNA gene sequences of members of the family
Staphylococcaceae showed the presence of para-and polyphyletic genera. This finding …
Staphylococcaceae showed the presence of para-and polyphyletic genera. This finding …
Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes
M García-López, JP Meier-Kolthoff, BJ Tindall… - Frontiers in …, 2019 - frontiersin.org
Although considerable progress has been made in recent years regarding the classification
of bacteria assigned to the phylum Bacteroidetes, there remains a need to further clarify …
of bacteria assigned to the phylum Bacteroidetes, there remains a need to further clarify …
[HTML][HTML] Lignocellulose degradation by rumen bacterial communities: New insights from metagenome analyses
Ruminant animals house a dense and diverse community of microorganisms in their rumen,
an enlarged compartment in their stomach, which provides a supportive environment for the …
an enlarged compartment in their stomach, which provides a supportive environment for the …
Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases
JE Clarridge III - Clinical microbiology reviews, 2004 - Am Soc Microbiol
The traditional identification of bacteria on the basis of phenotypic characteristics is
generally not as accurate as identification based on genotypic methods. Comparison of the …
generally not as accurate as identification based on genotypic methods. Comparison of the …
The uncultured microbial majority
▪ Abstract Since the delineation of 12 bacterial phyla by comparative phylogenetic analyses
of 16S ribosomal RNA in 1987 knowledge of microbial diversity has expanded dramatically …
of 16S ribosomal RNA in 1987 knowledge of microbial diversity has expanded dramatically …
Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes
PH Janssen - Applied and environmental microbiology, 2006 - Am Soc Microbiol
In 1909, H. Joel Conn (25) expressed the hope that methods would soon be at hand by
which the significance of the different bacteria present in any soil could be determined …
which the significance of the different bacteria present in any soil could be determined …
Biodiversity of vibrios
Vibrios are ubiquitous and abundant in the aquatic environment. A high abundance of
vibrios is also detected in tissues and/or organs of various marine algae and animals, eg …
vibrios is also detected in tissues and/or organs of various marine algae and animals, eg …