Benefits and limitations of genome-wide association studies

V Tam, N Patel, M Turcotte, Y Bossé, G Paré… - Nature Reviews …, 2019‏ - nature.com
Genome-wide association studies (GWAS) involve testing genetic variants across the
genomes of many individuals to identify genotype–phenotype associations. GWAS have …

MicroRNAs in stress signaling and human disease

JT Mendell, EN Olson - Cell, 2012‏ - cell.com
Disease is often the result of an aberrant or inadequate response to physiologic and
pathophysiologic stress. Studies over the last 10 years have uncovered a recurring …

Disease variants alter transcription factor levels and methylation of their binding sites

MJ Bonder, R Luijk, DV Zhernakova, M Moed… - Nature …, 2017‏ - nature.com
Most disease-associated genetic variants are noncoding, making it challenging to design
experiments to understand their functional consequences,. Identification of expression …

Common SNPs explain a large proportion of the heritability for human height

J Yang, B Benyamin, BP McEvoy, S Gordon… - Nature …, 2010‏ - nature.com
SNPs discovered by genome-wide association studies (GWASs) account for only a small
fraction of the genetic variation of complex traits in human populations. Where is the …

Hundreds of variants clustered in genomic loci and biological pathways affect human height

H Lango Allen, K Estrada, G Lettre, SI Berndt… - Nature, 2010‏ - nature.com
Most common human traits and diseases have a polygenic pattern of inheritance: DNA
sequence variants at many genetic loci influence the phenotype. Genome-wide association …

MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes

Y Li, CJ Willer, J Ding, P Scheet… - Genetic …, 2010‏ - Wiley Online Library
Genome‐wide association studies (GWAS) can identify common alleles that contribute to
complex disease susceptibility. Despite the large number of SNPs assessed in each study …

Epigenetic inheritance and the missing heritability

M Trerotola, V Relli, P Simeone, S Alberti - Human genomics, 2015‏ - Springer
Genome-wide association studies of complex physiological traits and diseases consistently
found that associated genetic factors, such as allelic polymorphisms or DNA mutations, only …

A ChIP-seq defined genome-wide map of vitamin D receptor binding: associations with disease and evolution

SV Ramagopalan, A Heger, AJ Berlanga… - Genome …, 2010‏ - genome.cshlp.org
Initially thought to play a restricted role in calcium homeostasis, the pleiotropic actions of
vitamin D in biology and their clinical significance are only now becoming apparent …

A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individuals

BL Browning, SR Browning - The American Journal of Human Genetics, 2009‏ - cell.com
We present methods for imputing data for ungenotyped markers and for inferring haplotype
phase in large data sets of unrelated individuals and parent-offspring trios. Our methods …

The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation

JK Pritchard, JK Pickrell, G Coop - Current biology, 2010‏ - cell.com
There has long been interest in understanding the genetic basis of human adaptation. To
what extent are phenotypic differences among human populations driven by natural …