Third generation sequencing transforming plant genome research: Current trends and challenges

U Medhi, C Chaliha, A Singh, BK Nath, E Kalita - Gene, 2024‏ - Elsevier
In recent years, third-generation sequencing (TGS) technologies have transformed
genomics and transcriptomics research, providing novel opportunities for significant …

Genomic and evolutionary relationships among wild and cultivated blueberry species

BR Manzanero, KP Kulkarni, N Vorsa, UK Reddy… - BMC plant biology, 2023‏ - Springer
Abstract Background Blueberries (Vaccinium section Cyanococcus) are an economically
important fruit crop in the United States. Understanding genetic structure and relationships in …

Complete plastid genome structure of 13 Asian Justicia (Acanthaceae) species: comparative genomics and phylogenetic analyses

Z Niu, Z Lin, Y Tong, X Chen, Y Deng - BMC Plant Biology, 2023‏ - Springer
Background Justicia L. is the largest genus in Acanthaceae Juss. and widely distributed in
tropical and subtropical regions of the world. Previous phylogenetic studies have proposed …

Unveiling the evolutionary history of lingonberry (Vaccinium vitis-idaea L.) through genome sequencing and assembly of European and North American subspecies

K Hirabayashi, SC Debnath… - G3: Genes, Genomes …, 2024‏ - academic.oup.com
Lingonberry (Vaccinium vitis-idaea L.) produces tiny red berries that are tart and nutty in
flavor. It grows widely in the circumpolar region, including Scandinavia, northern parts of …

The complete chloroplast genome of Elephantopus scaber L. (Vernonioideae, Asteraceae), a useful ethnomedicinal plant in asia

PAT Nguyen, DT Khang, PTT Nguyen… - … DNA Part B, 2023‏ - Taylor & Francis
Elephantopus scaber L. is a useful medicinal plant and has been used as a traditional
medicine for various diseases in Asia. In this study, we completed and characterized the …

[HTML][HTML] DNA extraction optimization and authentication of Vaccinium berries and their products by high-resolution DNA melting analysis

K Toth, HM Salo, S Kinnunen, TM Miettunen… - Food Control, 2024‏ - Elsevier
Food adulteration has been an issue in the food industry for many decades. The market for
natural and healthy products has been expanding and therefore the value of raw ingredients …

The First Complete Chloroplast Genome Sequence of Mortiño (Vaccinium floribundum) and Comparative Analyses with Other Vaccinium Species

KER López, CE Armijos, M Parra, ML Torres - Horticulturae, 2023‏ - mdpi.com
Vaccinium floribundum, commonly known as mortiño, is a native high Andean wild species
of cultural and economic importance. Genomic resources for V. floribundum are scarce, and …

[HTML][HTML] The conservative chloroplast genomic features and comparative analysis provide new evidence for the unification of Pennisetum and Cenchrus

B Wu, J Jia, D Luo, J Zhu, X Ma, H Yan, X Wang… - Industrial Crops and …, 2025‏ - Elsevier
Many species in the genera Pennisetum and Cenchrus are utilized as biofuel feedstocks
due to their high biomass yield and lignocellulosic content. However, some species possess …

Analysis of chloroplast genome structure and phylogeny of the traditional medicinal of Ardisia crispa (Myrsinaceae)

J Ye, Q Luo, Y Lang, N Ding, Y Jian, Z Wu, S Wei… - Scientific Reports, 2024‏ - nature.com
Ardisia crispa (Myrsinaceae) is an ethnomedicine with horticultural and important medicinal
values. Its morphology is complex, and its identification is difficult. We analyse the …

Comparative study on chloroplast genomes of three Hansenia forbesii varieties (Apiaceae)

C Zhu, Y Jiang, Y Bai, S Dong, S Zhirong - PLoS One, 2023‏ - journals.plos.org
To find the gene hypervariable regions of three varieties of Hansenia forbesii H. Boissieu
and determine their phylogenetic relationship, the chloroplast (cp) genome of these three …