Proteomics of human biological fluids for biomarker discoveries: technical advances and recent applications

L Dayon, O Cominetti, M Affolter - Expert review of proteomics, 2022 - Taylor & Francis
Introduction Biological fluids are routine samples for diagnostic testing and monitoring.
Blood samples are typically measured because of their moderate invasive collection and …

Cerebrospinal fluid: a target of some fungi and an overview

D Corrêa-Moreira, R Castro, GL da Costa… - Memórias do Instituto …, 2023 - SciELO Brasil
Meningitis is a potentially life-threatening infection characterised by the inflammation of the
leptomeningeal membranes. The estimated annual prevalence of 8.7 million cases globally …

Multienzyme deep learning models improve peptide de novo sequencing by mass spectrometry proteomics

C Gueto-Tettay, D Tang, L Happonen… - PLoS Computational …, 2023 - journals.plos.org
Generating and analyzing overlap** peptides through multienzymatic digestion is an
efficient procedure for de novo protein using from bottom-up mass spectrometry (MS) …

[HTML][HTML] The worldwide prevalence of herpes simplex virus Encephalitis and Meningitis: a systematic review and meta-analysis

H Rohani, R Arjmand, SH Mozhgani… - Turkish Archives of …, 2023 - ncbi.nlm.nih.gov
Given the relatively high frequency of central nervous system infections and considerable
mortality and morbidity reported to be caused by herpes simplex viruses among the other …

Metagenomic next-generation sequencing and proteomics analysis in pediatric viral encephalitis and meningitis

YL Wang, XT Guo, MY Zhu, YC Mao, XB Xu… - Frontiers in Cellular …, 2023 - frontiersin.org
Introduction Early and accurate identification of pathogens is essential for improved
outcomes in patients with viral encephalitis (VE) and/or viral meningitis (VM). Methods In our …

Deep proteomics network and machine learning analysis of human cerebrospinal fluid in Japanese encephalitis virus infection

T Bharucha, B Gangadharan, A Kumar… - Journal of Proteome …, 2023 - ACS Publications
Japanese encephalitis virus is a leading cause of neurological infection in the Asia-Pacific
region with no means of detection in more remote areas. We aimed to test the hypothesis of …

[HTML][HTML] Application of metabolomics in diagnostics and differentiation of meningitis: A narrative review with a critical approach to the literature

A Kozioł, M Pupek, Ł Lewandowski - Biomedicine & Pharmacotherapy, 2023 - Elsevier
Due to its high mortality rate associated with various life-threatening sequelae, meningitis
poses a vital problem in contemporary medicine. Numerous algorithms, many of which were …

Metabolomic characterization of cerebrospinal fluid from intracranial bacterial infection pediatric patients: a pilot study

Y Wang, Y Liu, R Chen, L Qiao - Molecules, 2021 - mdpi.com
Intracranial bacterial infection remains a major cause of morbidity and mortality in
neurosurgical cases. Metabolomic profiling of cerebrospinal fluid (CSF) holds great promise …

Temporal pathway analysis of cerebrospinal fluid proteome in herpes simplex encephalitis

A Nääs, P Li, C Ahlm, E Aurelius, JD Järhult… - Infectious …, 2023 - Taylor & Francis
Objectives We examined the temporal changes of the CSF proteome in patients with herpes
simplex encephalitis (HSE) during the course of the disease, in relation to anti-N-methyl-D …

Proteomic approaches to unravel mechanisms of antibiotic resistance and immune evasion of bacterial pathogens

E Torres-Sangiao, AD Giddey, C Leal Rodriguez… - Frontiers in …, 2022 - frontiersin.org
The profound effects of and distress caused by the global COVID-19 pandemic highlighted
what has been known in the health sciences a long time ago: that bacteria, fungi, viruses …