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Beyond the human genome project: the age of complete human genome sequences and pangenome references
The Human Genome Project was an enormous accomplishment, providing a foundation for
countless explorations into the genetics and genomics of the human species. Yet for many …
countless explorations into the genetics and genomics of the human species. Yet for many …
Global impact of proteoglycan science on human diseases
In this comprehensive review, we will dissect the impact of research on proteoglycans
focusing on recent developments involved in their synthesis, degradation, and interactions …
focusing on recent developments involved in their synthesis, degradation, and interactions …
Sources of gene expression variation in a globally diverse human cohort
Genetic variation that influences gene expression and splicing is a key source of phenotypic
diversity,,,–. Although invaluable, studies investigating these links in humans have been …
diversity,,,–. Although invaluable, studies investigating these links in humans have been …
Coordination of alternative splicing and alternative polyadenylation revealed by targeted long read sequencing
Nervous system development is associated with extensive regulation of alternative splicing
(AS) and alternative polyadenylation (APA). AS and APA have been extensively studied in …
(AS) and alternative polyadenylation (APA). AS and APA have been extensively studied in …
Single-cell and spatial transcriptomics: Bridging current technologies with long-read sequencing
CU Yuan, FX Quah, M Hemberg - Molecular Aspects of Medicine, 2024 - Elsevier
Single-cell technologies have transformed biomedical research over the last decade,
opening up new possibilities for understanding cellular heterogeneity, both at the genomic …
opening up new possibilities for understanding cellular heterogeneity, both at the genomic …
Long-read subcellular fractionation and sequencing reveals the translational fate of full-length mRNA isoforms during neuronal differentiation
AJ Ritter, JM Draper, C Vollmers… - Genome Research, 2024 - genome.cshlp.org
Alternative splicing (AS) alters the cis-regulatory landscape of mRNA isoforms, leading to
transcripts with distinct localization, stability, and translational efficiency. To rigorously …
transcripts with distinct localization, stability, and translational efficiency. To rigorously …
Long-read sequencing transcriptome quantification with lr-kallisto
RNA abundance quantification has become routine and affordable thanks to high-
throughput “short-read” technologies that provide accurate molecule counts at the gene …
throughput “short-read” technologies that provide accurate molecule counts at the gene …
mRNA initiation and termination are spatially coordinated
The expression of a precise mRNA transcriptome is crucial for establishing cell identity and
function, with dozens of alternative isoforms produced for a single gene sequence. The …
function, with dozens of alternative isoforms produced for a single gene sequence. The …
Integration of multi-omics technologies for molecular diagnosis in ataxia patients
S Audet, V Triassi, M Gelinas, N Legault-Cadieux… - Frontiers in …, 2024 - frontiersin.org
Background: Episodic ataxias are rare neurological disorders characterized by recurring
episodes of imbalance and coordination difficulties. Obtaining definitive molecular …
episodes of imbalance and coordination difficulties. Obtaining definitive molecular …
MicroRNAs provide negative feedback and stability in gene regulatory network models of cell-state transitions
The development of multicellular organisms occurs through a series of cell state transitions
controlled by gene regulatory networks. Central to these networks are transcription factors …
controlled by gene regulatory networks. Central to these networks are transcription factors …