ADP-ribosylation from molecular mechanisms to therapeutic implications

MJ Suskiewicz, E Prokhorova, JGM Rack, I Ahel - Cell, 2023 - cell.com
ADP-ribosylation is a ubiquitous modification of biomolecules, including proteins and
nucleic acids, that regulates various cellular functions in all kingdoms of life. The recent …

The expanding universe of PARP1-mediated molecular and therapeutic mechanisms

D Huang, WL Kraus - Molecular cell, 2022 - cell.com
ADP-ribosylation (ADPRylation) is a post-translational modification of proteins catalyzed by
ADP-ribosyl transferase (ART) enzymes, including nuclear PARPs (eg, PARP1 and PARP2) …

Classification of intrinsically disordered regions and proteins

R Van Der Lee, M Buljan, B Lang, RJ Weatheritt… - Chemical …, 2014 - ACS Publications
Over the past decade, we have observed a massive increase in the amount of information
describing protein sequences from a variety of organisms. 1, 2 While this may reflect the …

Updated protein domain annotation of the PARP protein family sheds new light on biological function

MJ Suskiewicz, D Munnur, Ø Strømland… - Nucleic Acids …, 2023 - academic.oup.com
AlphaFold2 and related computational tools have greatly aided studies of structural biology
through their ability to accurately predict protein structures. In the present work, we explored …

New insights into the molecular and cellular functions of poly (ADP-ribose) and PARPs

BA Gibson, WL Kraus - Nature reviews Molecular cell biology, 2012 - nature.com
Abstract Poly (ADP-ribose) polymerases (PARPs) are enzymes that transfer ADP-ribose
groups to target proteins and thereby affect various nuclear and cytoplasmic processes. The …

A million peptide motifs for the molecular biologist

P Tompa, NE Davey, TJ Gibson, MM Babu - Molecular cell, 2014 - cell.com
A molecular description of functional modules in the cell is the focus of many high-
throughput studies in the postgenomic era. A large portion of biomolecular interactions in …

Full-length GSDME mediates pyroptosis independent from cleavage

B Zhou, Z Jiang, M Dai, Y Ai, L **ao, C Zhong… - Nature Cell …, 2024 - nature.com
Gasdermin (GSDM) family proteins, known as the executors of pyroptosis, undergo protease-
mediated cleavage before inducing pyroptosis. We here discovered a form of pyroptosis …

Functions of PARylation in DNA damage repair pathways

H Wei, X Yu - Genomics, proteomics & bioinformatics, 2016 - academic.oup.com
Protein poly ADP-ribosylation (PARylation) is a widespread post-translational modification at
DNA lesions, which is catalyzed by poly (ADP-ribose) polymerases (PARPs). This …

Short linear motifs: ubiquitous and functionally diverse protein interaction modules directing cell regulation

K Van Roey, B Uyar, RJ Weatheritt, H Dinkel… - Chemical …, 2014 - ACS Publications
The eukaryotic cell is a bustling collection of macromolecules acting cooperatively to
mediate the functions required for cell viability. Specific, context-dependent and tightly …

ADP-ribosylation, a multifaceted posttranslational modification involved in the control of cell physiology in health and disease

B Lüscher, M Bütepage, L Eckei, S Krieg… - Chemical …, 2018 - ACS Publications
Posttranslational modifications (PTMs) regulate protein functions and interactions. ADP-
ribosylation is a PTM, in which ADP-ribosyltransferases use nicotinamide adenine …