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A modern primer on processing in memory
Modern computing systems are overwhelmingly designed to move data to computation. This
design choice goes directly against at least three key trends in computing that cause …
design choice goes directly against at least three key trends in computing that cause …
A framework for high-throughput sequence alignment using real processing-in-memory systems
Motivation Sequence alignment is a memory bound computation whose performance in
modern systems is limited by the memory bandwidth bottleneck. Processing-in-memory …
modern systems is limited by the memory bandwidth bottleneck. Processing-in-memory …
Evaluating machine learningworkloads on memory-centric computing systems
Training machine learning (ML) algorithms is a computationally intensive process, which is
frequently memory-bound due to repeatedly accessing large training datasets. As a result …
frequently memory-bound due to repeatedly accessing large training datasets. As a result …
DRAM bender: An extensible and versatile FPGA-based infrastructure to easily test state-of-the-art DRAM chips
To understand and improve DRAM performance, reliability, security, and energy efficiency,
prior works study characteristics of commodity DRAM chips. Unfortunately, state-of-the-art …
prior works study characteristics of commodity DRAM chips. Unfortunately, state-of-the-art …
WFA-FPGA: An efficient accelerator of the wavefront algorithm for short and long read genomics alignment
In the last years, advances in genome sequencing technologies have enabled the
proliferation of genomic applications that guide personalized medicine. These applications …
proliferation of genomic applications that guide personalized medicine. These applications …
BLEND: a fast, memory-efficient and accurate mechanism to find fuzzy seed matches in genome analysis
Generating the hash values of short subsequences, called seeds, enables quickly
identifying similarities between genomic sequences by matching seeds with a single lookup …
identifying similarities between genomic sequences by matching seeds with a single lookup …
Swiftrl: Towards efficient reinforcement learning on real processing-in-memory systems
Reinforcement Learning (RL) is the process by which an agent learns optimal behavior
through interactions with experience datasets, all of which aim to maximize the reward …
through interactions with experience datasets, all of which aim to maximize the reward …
Simplepim: A software framework for productive and efficient processing-in-memory
Data movement between memory and processors is a major bottleneck in modern
computing systems. The processing-in-memory (PIM) paradigm aims to alleviate this …
computing systems. The processing-in-memory (PIM) paradigm aims to alleviate this …
Transpimlib: Efficient transcendental functions for processing-in-memory systems
Processing-in-memory (PIM) promises to alleviate the data movement bottleneck in modern
computing systems. However, current real-world PIM systems have the inherent …
computing systems. However, current real-world PIM systems have the inherent …
Accelerating genome analysis via algorithm-architecture co-design
High-throughput sequencing (HTS) technologies have revolutionized the field of genomics,
enabling rapid and cost-effective genome analysis for various applications. However, the …
enabling rapid and cost-effective genome analysis for various applications. However, the …