Tumor heterogeneity: preclinical models, emerging technologies, and future applications

M Proietto, M Crippa, C Damiani, V Pasquale… - Frontiers in …, 2023 - frontiersin.org
Heterogeneity describes the differences among cancer cells within and between tumors. It
refers to cancer cells describing variations in morphology, transcriptional profiles …

Yeast systems biology: model organism and cell factory

J Nielsen - Biotechnology journal, 2019 - Wiley Online Library
For thousands of years, the yeast Saccharomyces cerevisiae (S. cerevisiae) has served as a
cell factory for the production of bread, beer, and wine. In more recent years, this yeast has …

A functional perspective on phenotypic heterogeneity in microorganisms

M Ackermann - Nature Reviews Microbiology, 2015 - nature.com
Most microbial communities consist of a genetically diverse assembly of different organisms,
and the level of genetic diversity plays an important part in community properties and …

T cell metabolism drives immunity

MD Buck, D O'sullivan, EL Pearce - Journal of Experimental Medicine, 2015 - rupress.org
Lymphocytes must adapt to a wide array of environmental stressors as part of their normal
development, during which they undergo a dramatic metabolic remodeling process …

Kidney glycolysis serves as a mammalian phosphate sensor that maintains phosphate homeostasis

W Zhou, P Simic, IY Zhou, P Caravan, XV Parada… - The Journal of Clinical …, 2023 - jci.org
How phosphate levels are detected in mammals is unknown. The bone-derived hormone
fibroblast growth factor 23 (FGF23) lowers blood phosphate levels by reducing kidney …

Trehalose metabolism in plants

JE Lunn, I Delorge, CM Figueroa, P Van Dijck… - The Plant …, 2014 - Wiley Online Library
Trehalose is a quantitatively important compatible solute and stress protectant in many
organisms, including green algae and primitive plants. These functions have largely been …

Systems-level analysis of mechanisms regulating yeast metabolic flux

SR Hackett, VRT Zanotelli, W Xu, J Goya, JO Park… - Science, 2016 - science.org
INTRODUCTION Metabolism is among the most strongly conserved processes across all
domains of life and is crucial for both bioengineering and disease research, yet we still have …

Systems biology of metabolism

J Nielsen - Annual review of biochemistry, 2017 - annualreviews.org
Metabolism is highly complex and involves thousands of different connected reactions; it is
therefore necessary to use mathematical models for holistic studies. The use of …

A global resource allocation strategy governs growth transition kinetics of Escherichia coli

DW Erickson, SJ Schink, V Patsalo, JR Williamson… - Nature, 2017 - nature.com
A grand challenge of systems biology is to predict the kinetic responses of living systems to
perturbations starting from the underlying molecular interactions. Changes in the nutrient …

Exploiting nongenetic cell-to-cell variation for enhanced biosynthesis

Y **ao, CH Bowen, D Liu, F Zhang - Nature chemical biology, 2016 - nature.com
Biosynthesis enables renewable production of manifold compounds, yet often biosynthetic
performance must be improved for it to be economically feasible. Nongenetic, cell-to-cell …