Diffusion models: A comprehensive survey of methods and applications
Diffusion models have emerged as a powerful new family of deep generative models with
record-breaking performance in many applications, including image synthesis, video …
record-breaking performance in many applications, including image synthesis, video …
Generative models as an emerging paradigm in the chemical sciences
Traditional computational approaches to design chemical species are limited by the need to
compute properties for a vast number of candidates, eg, by discriminative modeling …
compute properties for a vast number of candidates, eg, by discriminative modeling …
Geometric latent diffusion models for 3d molecule generation
Generative models, especially diffusion models (DMs), have achieved promising results for
generating feature-rich geometries and advancing foundational science problems such as …
generating feature-rich geometries and advancing foundational science problems such as …
Machine learning in preclinical drug discovery
Drug-discovery and drug-development endeavors are laborious, costly and time consuming.
These programs can take upward of 12 years and cost US $2.5 billion, with a failure rate of …
These programs can take upward of 12 years and cost US $2.5 billion, with a failure rate of …
Geodiff: A geometric diffusion model for molecular conformation generation
Predicting molecular conformations from molecular graphs is a fundamental problem in
cheminformatics and drug discovery. Recently, significant progress has been achieved with …
cheminformatics and drug discovery. Recently, significant progress has been achieved with …
Graph neural networks: foundation, frontiers and applications
The field of graph neural networks (GNNs) has seen rapid and incredible strides over the
recent years. Graph neural networks, also known as deep learning on graphs, graph …
recent years. Graph neural networks, also known as deep learning on graphs, graph …
A comprehensive survey on deep graph representation learning
Graph representation learning aims to effectively encode high-dimensional sparse graph-
structured data into low-dimensional dense vectors, which is a fundamental task that has …
structured data into low-dimensional dense vectors, which is a fundamental task that has …
Generative models for molecular discovery: Recent advances and challenges
Abstract Development of new products often relies on the discovery of novel molecules.
While conventional molecular design involves using human expertise to propose …
While conventional molecular design involves using human expertise to propose …
Self-supervised learning of graph neural networks: A unified review
Deep models trained in supervised mode have achieved remarkable success on a variety of
tasks. When labeled samples are limited, self-supervised learning (SSL) is emerging as a …
tasks. When labeled samples are limited, self-supervised learning (SSL) is emerging as a …
Self-supervised learning: Generative or contrastive
Deep supervised learning has achieved great success in the last decade. However, its
defects of heavy dependence on manual labels and vulnerability to attacks have driven …
defects of heavy dependence on manual labels and vulnerability to attacks have driven …