Tectonics, climate and the diversification of the tropical African terrestrial flora and fauna

TLP Couvreur, G Dauby, A Blach‐Overgaard… - Biological …, 2021 - Wiley Online Library
Tropical Africa is home to an astonishing biodiversity occurring in a variety of ecosystems.
Past climatic change and geological events have impacted the evolution and diversification …

Strategies for reducing per‐sample costs in target capture sequencing for phylogenomics and population genomics in plants

H Hale, EM Gardner, J Viruel, L Pokorny… - Applications in plant …, 2020 - Wiley Online Library
The reduced cost of high‐throughput sequencing and the development of gene sets with
wide phylogenetic applicability has led to the rise of sequence capture methods as a …

Large‐scale genomic sequence data resolve the deepest divergences in the legume phylogeny and support a near‐simultaneous evolutionary origin of all six …

EJM Koenen, DI Ojeda, R Steeves, J Migliore… - New …, 2020 - Wiley Online Library
Phylogenomics is increasingly used to infer deep‐branching relationships while revealing
the complexity of evolutionary processes such as incomplete lineage sorting, hybridization …

Highly resolved papilionoid legume phylogeny based on plastid phylogenomics

IS Choi, D Cardoso, LP De Queiroz… - Frontiers in Plant …, 2022 - frontiersin.org
Comprising 501 genera and around 14,000 species, Papilionoideae is not only the largest
subfamily of Fabaceae (Leguminosae; legumes), but also one of the most extraordinarily …

Hybrid capture of 964 nuclear genes resolves evolutionary relationships in the mimosoid legumes and reveals the polytomous origins of a large pantropical radiation

EJM Koenen, C Kidner, ÉR de Souza… - American Journal of …, 2020 - Wiley Online Library
PREMISE Targeted enrichment methods facilitate sequencing of hundreds of nuclear loci to
enhance phylogenetic resolution and elucidate why some parts of the “tree of life” are …

Target capture and genome skimming for plant diversity studies

FF Pezzini, G Ferrari, LL Forrest, ML Hart… - Applications in Plant …, 2023 - Wiley Online Library
Recent technological advances in long‐read high‐throughput sequencing and assembly
methods have facilitated the generation of annotated chromosome‐scale whole‐genome …

Testing generic limits in Cercidoideae (Leguminosae): Insights from plastid and duplicated nuclear gene sequences

C Sinou, W Cardinal‐McTeague, A Bruneau - Taxon, 2020 - Wiley Online Library
Reconstructing the phylogenetic history of species in large taxonomic groups remains a
challenge despite ever increasing access to molecular data. In subfamily Cercidoideae …

Introgression across evolutionary scales suggests reticulation contributes to Amazonian tree diversity

RJ Schley, RT Pennington… - Molecular …, 2020 - Wiley Online Library
Hybridization has the potential to generate or homogenize biodiversity and is a particularly
common phenomenon in plants, with an estimated 25% of plant species undergoing …

Incomplete lineage sorting and local extinction shaped the complex evolutionary history of the Paleogene relict conifer genus, Chamaecyparis (Cupressaceae)

Y Wang, M Ruhsam, R Milne, SW Graham, J Li… - Molecular phylogenetics …, 2022 - Elsevier
Inferring accurate biogeographic history of plant taxa with an East Asia (EA)-North America
(NA) is usually hindered by conflicting phylogenies and a poor fossil record. The current …

Evolutionary history of the leguminous flower

AA Sinjushin - Biology Bulletin Reviews, 2021 - Springer
The contemporary evolutionary developmental biology includes molecular phylogeny,
studies on morphology and morphogenesis, genetics, and genomics. The most reliable …