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NCBI prokaryotic genome annotation pipeline
T Tatusova, M DiCuccio, A Badretdin… - Nucleic acids …, 2016 - academic.oup.com
Recent technological advances have opened unprecedented opportunities for large-scale
sequencing and analysis of populations of pathogenic species in disease outbreaks, as well …
sequencing and analysis of populations of pathogenic species in disease outbreaks, as well …
Mycobacterium tuberculosis metabolism
DF Warner - Cold Spring Harbor perspectives in …, 2015 - perspectivesinmedicine.cshlp.org
Metabolism underpins the physiology and pathogenesis of Mycobacterium tuberculosis.
However, although experimental mycobacteriology has provided key insights into the …
However, although experimental mycobacteriology has provided key insights into the …
Tolerance and Persistence to Drugs: A Main Challenge in the Fight Against Mycobacterium tuberculosis
F Boldrin, R Provvedi, L Cioetto Mazzabò… - Frontiers in …, 2020 - frontiersin.org
The treatment of tuberculosis is extremely long. One of the reasons why Mycobacterium
tuberculosis elimination from the organism takes so long is that in particular environmental …
tuberculosis elimination from the organism takes so long is that in particular environmental …
RefSeq microbial genomes database: new representation and annotation strategy
T Tatusova, S Ciufo, B Fedorov, K O'Neill… - Nucleic acids …, 2014 - academic.oup.com
The source of the microbial genomic sequences in the RefSeq collection is the set of primary
sequence records submitted to the International Nucleotide Sequence Database public …
sequence records submitted to the International Nucleotide Sequence Database public …
Bacillus subtilis, the model Gram‐positive bacterium: 20 years of annotation refinement
Genome annotation is, nowadays, performed via automatic pipelines that cannot
discriminate between right and wrong annotations. Given their importance in increasing the …
discriminate between right and wrong annotations. Given their importance in increasing the …
[HTML][HTML] PolyTB: a genomic variation map for Mycobacterium tuberculosis
Tuberculosis (TB) caused by Mycobacterium tuberculosis (Mtb) is the second major cause of
death from an infectious disease worldwide. Recent advances in DNA sequencing are …
death from an infectious disease worldwide. Recent advances in DNA sequencing are …
[HTML][HTML] Genome wide approaches discover novel Mycobacterium tuberculosis antigens as correlates of infection, disease, immunity and targets for vaccination
M Coppola, THM Ottenhoff - Seminars in immunology, 2018 - Elsevier
Every day approximately six thousand people die of Tuberculosis (TB). Its causative agent,
Mycobacterium tuberculosis (Mtb), is an ancient pathogen that through its evolution …
Mycobacterium tuberculosis (Mtb), is an ancient pathogen that through its evolution …
Genome-scale analyses of Escherichia coli and Salmonella enterica AraC reveal noncanonical targets and an expanded core regulon
Escherichia coli AraC is a well-described transcription activator of genes involved in
arabinose metabolism. Using complementary genomic approaches, chromatin …
arabinose metabolism. Using complementary genomic approaches, chromatin …
Updated reference genome sequence and annotation of Mycobacterium bovis AF2122/97
We report here an update to the reference genome sequence of the bovine tuberculosis
bacillus Mycobacterium bovis AF2122/97, generated using an integrative multiomics …
bacillus Mycobacterium bovis AF2122/97, generated using an integrative multiomics …
Role of intragenic binding of cAMP responsive protein (CRP) in regulation of the succinate dehydrogenase genes Rv0249c-Rv0247c in TB complex mycobacteria
Bacterial pathogens adapt to changing environments within their hosts, and the signaling
molecule adenosine 3′, 5′-cyclic monophosphate (cAMP) facilitates this process. In this …
molecule adenosine 3′, 5′-cyclic monophosphate (cAMP) facilitates this process. In this …