Biomolecules under mechanical force
Recent advances in single molecule experiments have raised many challenges. These
challenges can be met by a proper understanding of the inter-and intra-molecular …
challenges can be met by a proper understanding of the inter-and intra-molecular …
Nonlinear dynamics and statistical physics of DNA
M Peyrard - Nonlinearity, 2004 - iopscience.iop.org
DNA is not only an essential object of study for biologists—it also raises very interesting
questions for physicists. This paper discuss its nonlinear dynamics, its statistical mechanics …
questions for physicists. This paper discuss its nonlinear dynamics, its statistical mechanics …
Nonlinear dynamics of topological solitons in DNA
LV Yakushevich, AV Savin, LI Manevitch - Physical Review E, 2002 - APS
Dynamics of topological solitons describing open states in the DNA double helix are studied
in the framework of a model that takes into account asymmetry of the helix. It is shown that …
in the framework of a model that takes into account asymmetry of the helix. It is shown that …
Higher order investigation on modulated waves in the Peyrard–Bishop–Dauxois DNA model
Despite the widespread use of transcendental functions in the modeling of the dynamics of
DNA, most research efforts are limited in their analytical studies of this enthralling system to …
DNA, most research efforts are limited in their analytical studies of this enthralling system to …
Thermal denaturation of a helicoidal DNA model
We study the static and dynamical properties of DNA in the vicinity of its melting transition, ie,
the separation of the two strands upon heating. The investigation is based on a simple …
the separation of the two strands upon heating. The investigation is based on a simple …
Base pair opening in a damped helicoidal Joyeux-Buyukdagli model of DNA in an external force field
Upon the Joyeux-Buyukdagli model of DNA, the helicoidal interactions are introduced, and
their effects on the dynamical behaviors of the molecule investigated. A theoretical …
their effects on the dynamical behaviors of the molecule investigated. A theoretical …
A review on nonlinear DNA physics
The study and the investigation of structural and dynamical properties of complex systems
have attracted considerable interest among scientists in general and physicists and …
have attracted considerable interest among scientists in general and physicists and …
Thermodynamics of twisted DNA with solvent interaction
M Zoli - The Journal of chemical physics, 2011 - pubs.aip.org
The imaginary time path integral formalism is applied to a nonlinear Hamiltonian for a short
fragment of heterogeneous DNA with a stabilizing solvent interaction term. Torsional effects …
fragment of heterogeneous DNA with a stabilizing solvent interaction term. Torsional effects …