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Eukaryotic core promoters and the functional basis of transcription initiation
Abstract RNA polymerase II (Pol II) core promoters are specialized DNA sequences at
transcription start sites of protein-coding and non-coding genes that support the assembly of …
transcription start sites of protein-coding and non-coding genes that support the assembly of …
Defining functional DNA elements in the human genome
With the completion of the human genome sequence, attention turned to identifying and
annotating its functional DNA elements. As a complement to genetic and comparative …
annotating its functional DNA elements. As a complement to genetic and comparative …
The connectome of an insect brain
Brains contain networks of interconnected neurons and so knowing the network architecture
is essential for understanding brain function. We therefore mapped the synaptic-resolution …
is essential for understanding brain function. We therefore mapped the synaptic-resolution …
FlyBase: a guided tour of highlighted features
LS Gramates, J Agapite, H Attrill, BR Calvi… - Genetics, 2022 - academic.oup.com
FlyBase provides a centralized resource for the genetic and genomic data of Drosophila
melanogaster. As FlyBase enters our fourth decade of service to the research community …
melanogaster. As FlyBase enters our fourth decade of service to the research community …
BigStitcher: reconstructing high-resolution image datasets of cleared and expanded samples
D Hörl, F Rojas Rusak, F Preusser, P Tillberg… - Nature …, 2019 - nature.com
Light-sheet imaging of cleared and expanded samples creates terabyte-sized datasets that
consist of many unaligned three-dimensional image tiles, which must be reconstructed …
consist of many unaligned three-dimensional image tiles, which must be reconstructed …
Independent optical excitation of distinct neural populations
Optogenetic tools enable examination of how specific cell types contribute to brain circuit
functions. A long-standing question is whether it is possible to independently activate two …
functions. A long-standing question is whether it is possible to independently activate two …
The neuronal architecture of the mushroom body provides a logic for associative learning
We identified the neurons comprising the Drosophila mushroom body (MB), an associative
center in invertebrate brains, and provide a comprehensive map describing their potential …
center in invertebrate brains, and provide a comprehensive map describing their potential …
Dopamine promotes head direction plasticity during orienting movements
In neural networks that store information in their connection weights, there is a tradeoff
between sensitivity and stability,. Connections must be plastic to incorporate new …
between sensitivity and stability,. Connections must be plastic to incorporate new …
BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets
BigNeuron is an open community bench-testing platform with the goal of setting open
standards for accurate and fast automatic neuron tracing. We gathered a diverse set of …
standards for accurate and fast automatic neuron tracing. We gathered a diverse set of …
Optimized tools for multicolor stochastic labeling reveal diverse stereotyped cell arrangements in the fly visual system
A Nern, BD Pfeiffer, GM Rubin - Proceedings of the National Academy of …, 2015 - pnas.org
We describe the development and application of methods for high-throughput
neuroanatomy in Drosophila using light microscopy. These tools enable efficient multicolor …
neuroanatomy in Drosophila using light microscopy. These tools enable efficient multicolor …