Effect of nitrogen fertilization on the abundance of nitrogen cycling genes in agricultural soils: a meta-analysis of field studies

Y Ouyang, SE Evans, ML Friesen… - Soil Biology and …, 2018 - Elsevier
Quantification of functional genes involved in nitrogen (N) transformation improves our
understanding of N-cycling microbial population responses to environmental disturbance …

[HTML][HTML] A metagenomic and amplicon sequencing combined approach reveals the best primers to study marine aerobic anoxygenic phototrophs

CR Gazulla, AM Cabello, P Sánchez, JM Gasol… - Microbial Ecology, 2023 - Springer
Studies based on protein-coding genes are essential to describe the diversity within
bacterial functional groups. In the case of aerobic anoxygenic phototrophic (AAP) bacteria …

Denitrification by Anaeromyxobacter dehalogenans, a Common Soil Bacterium Lacking the Nitrite Reductase Genes nirS and nirK

JR Onley, S Ahsan, RA Sanford… - Applied and …, 2018 - Am Soc Microbiol
The versatile soil bacterium Anaeromyxobacter dehalogenans lacks the hallmark
denitrification genes nirS and nirK (encoding NO2−→ NO reductases) and couples growth to …

Differences in microbial community structure and nitrogen cycling in natural and drained tropical peatland soils

M Espenberg, M Truu, Ü Mander, K Kasak, H Nõlvak… - Scientific Reports, 2018 - nature.com
Tropical peatlands, which play a crucial role in the maintenance of different ecosystem
services, are increasingly drained for agriculture, forestry, peat extraction and human …

Reduction of N2O emission by biochar and/or 3, 4-dimethylpyrazole phosphate (DMPP) is closely linked to soil ammonia oxidizing bacteria and nosZI-N2O reducer …

H Chen, C Yin, X Fan, M Ye, H Peng, T Li… - Science of The Total …, 2019 - Elsevier
Biochar has been demonstrated to reduce nitrous oxide (N 2 O) emissions from soils, but its
effect is highly soil-dependent. In particular, in soils with strong nitrification potential, biochar …

Relative Contribution of nirK- and nirS- Bacterial Denitrifiers as Well as Fungal Denitrifiers to Nitrous Oxide Production from Dairy Manure Compost

K Maeda, S Toyoda, L Philippot, S Hattori… - … science & technology, 2017 - ACS Publications
The relative contribution of fungi, bacteria, and nirS and nirK denirifiers to nitrous oxide
(N2O) emission with unknown isotopic signature from dairy manure compost was examined …

An evaluation of primers for detecting denitrifiers via their functional genes

Y Ma, JL Zilles, AD Kent - Environmental microbiology, 2019 - Wiley Online Library
Microbial populations provide nitrogen cycling ecosystem services at the nexus of
agriculture, environmental quality and climate change. Denitrification, in particular, impacts …

Effects of nitrification inhibitor and herbicides on nitrification, nitrite and nitrate consumptions and nitrous oxide emission in an Australian sugarcane soil

M Zhang, W Wang, L Tang, M Heenan, Z Xu - Biology and Fertility of Soils, 2018 - Springer
This study evaluated the impacts of a nitrification inhibitor (3, 4-dimethylpyrazole phosphate,
DMPP) and herbicides (atrazine and glyphosate) on nitrification, gross nitrite, and nitrate …

Phylogenetics and environmental distribution of nitric oxide-forming nitrite reductases reveal their distinct functional and ecological roles

G Pold, G Bonilla-Rosso, A Saghaï… - ISME …, 2024 - academic.oup.com
The two evolutionarily unrelated nitric oxide-producing nitrite reductases, NirK and NirS, are
best known for their redundant role in denitrification. They are also often found in organisms …

Denitrification Aligns with N2 Fixation in Red Sea Corals

A Tilstra, YC El-Khaled, F Roth, N Rädecker… - Scientific Reports, 2019 - nature.com
Denitrification may potentially alleviate excess nitrogen (N) availability in coral holobionts to
maintain a favourable N to phosphorous ratio in the coral tissue. However, little is known …