GalaxyWater-CNN: Prediction of water positions on the protein structure by a 3D-convolutional neural network
S Park, C Seok - Journal of Chemical Information and Modeling, 2022 - ACS Publications
Proteins interact with numerous water molecules to perform their physiological functions in
biological organisms. Most water molecules act as solvent media; hence, their roles may be …
biological organisms. Most water molecules act as solvent media; hence, their roles may be …
Reverse vaccinology approach to design a novel multi-epitope vaccine candidate against COVID-19: an in silico study
Abstract At present, novel Coronavirus (2019-nCoV, the causative agent of COVID-19) has
caused worldwide social and economic disruption. The disturbing statistics of this infection …
caused worldwide social and economic disruption. The disturbing statistics of this infection …
A systematic review on antioxidant and antiinflammatory activity of Sesame (Sesamum indicum L.) oil and further confirmation of antiinflammatory activity by chemical …
Traditionally, sesame oil (SO) has been used as a popular food and medicine. The review
aims to summarize the antioxidant and antiinflammatory effects of SO and its identified …
aims to summarize the antioxidant and antiinflammatory effects of SO and its identified …
GalaxyPepDock: a protein–peptide docking tool based on interaction similarity and energy optimization
Protein–peptide interactions are involved in a wide range of biological processes and are
attractive targets for therapeutic purposes because of their small interfaces. Therefore …
attractive targets for therapeutic purposes because of their small interfaces. Therefore …
Designing a multi-epitope vaccine candidate to combat MERS-CoV by employing an immunoinformatics approach
Currently, no approved vaccine is available against the Middle East respiratory syndrome
coronavirus (MERS-CoV), which causes severe respiratory disease. The spike glycoprotein …
coronavirus (MERS-CoV), which causes severe respiratory disease. The spike glycoprotein …
Immunoinformatics design of a structural proteins driven multi-epitope candidate vaccine against different SARS-CoV-2 variants based on fynomer
The ideal vaccines for combating diseases that may emerge in the future require more than
simply inactivating a few pathogenic strains. This study aims to provide a peptide-based …
simply inactivating a few pathogenic strains. This study aims to provide a peptide-based …
Designing a Multi-epitope Vaccine against the SARS-CoV-2 Variant based on an Immunoinformatics Approach
Background: SARS-CoV-2 is a life-threatening virus in the world. Scientific evidence
indicates that this pathogen will emerge again in the future. Although the current vaccines …
indicates that this pathogen will emerge again in the future. Although the current vaccines …
GalaxyRefine2: simultaneous refinement of inaccurate local regions and overall protein structure
The 3D structure of a protein can be predicted from its amino acid sequence with high
accuracy for a large fraction of cases because of the availability of large quantities of …
accuracy for a large fraction of cases because of the availability of large quantities of …
Reverse vaccinology assisted designing of multiepitope-based subunit vaccine against SARS-CoV-2
Abstract Background Coronavirus disease 2019 (COVID-19) linked with severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2) cause severe illness and life-threatening …
respiratory syndrome coronavirus 2 (SARS-CoV-2) cause severe illness and life-threatening …
[HTML][HTML] Molecular architecture and dynamics of SARS-CoV-2 envelope by integrative modeling
Despite tremendous efforts, the exact structure of SARS-CoV-2 and related
betacoronaviruses remains elusive. SARS-CoV-2 envelope is a key structural component of …
betacoronaviruses remains elusive. SARS-CoV-2 envelope is a key structural component of …