Exploring fish microbial communities to mitigate emerging diseases in aquaculture

I de Bruijn, Y Liu, GF Wiegertjes… - FEMS Microbiology …, 2018 - academic.oup.com
Aquaculture is the fastest growing animal food sector worldwide and expected to further
increase to feed the growing human population. However, existing and (re-) emerging …

Taxonomic, phylogenetic, and ecological diversity of methanogenic Archaea

JL Garcia, BKC Patel, B Ollivier - Anaerobe, 2000 - Elsevier
1Laboratoire de Microbiologie IRD, Universite de Provence, ESIL case 925, 163 Avenue
de Luminy, 13288 Marseille cedex 9, France 2Microbial Discovery Research Unit, School of …

Factors sha** the abundance and diversity of the gut archaeome across the animal kingdom

CM Thomas, E Desmond-Le Quéméner… - Nature …, 2022 - nature.com
Archaea are common constituents of the gut microbiome of humans, ruminants, and termites
but little is known about their diversity and abundance in other animals. Here, we analyse …

The Diversity of Archaea and Bacteria in Association with the Roots of Zea mays L.

MK Chelius, EW Triplett - Microbial ecology, 2001 - JSTOR
The diversity of bacteria and archaea associating on the surface and interior of maize roots
(Zea mays L.) was investigated. A bacterial 16S rDNA primer was designed to amplify …

An evaluation of terminal‐restriction fragment length polymorphism (T‐RFLP) analysis for the study of microbial community structure and dynamics

AM Osborn, ERB Moore… - Environmental …, 2000 - Wiley Online Library
A systematic evaluation of the value and potential of terminal‐restriction fragment length
polymorphism (T‐RFLP) analysis for the study of microbial community structure has been …

Ecological significance of compatible solute accumulation by micro-organisms: from single cells to global climate

DT Welsh - FEMS microbiology reviews, 2000 - academic.oup.com
The osmoadaptation of most micro-organisms involves the accumulation of K+ ions and one
or more of a restricted range of low molecular mass organic solutes, collectively termed …

The fish microbiome and its interactions with mucosal tissues

DL Merrifield, A Rodiles - Mucosal health in aquaculture, 2015 - Elsevier
The microbiomes of fish are complex communities comprising protists, yeasts, viruses, and
members of the Bacteria and Archaea. These communities inhabit the skin, gills, and …

Population structure and phylogenetic characterization of marine benthic archaea in deep-sea sediments

C Vetriani, HW Jannasch, BJ MacGregor… - Applied and …, 1999 - journals.asm.org
During the past few years Archaea have been recognized as a widespread and significant
component of marine picoplankton assemblages and, more recently, the presence of novel …

Phylogenetic specificity and reproducibility and new method for analysis of terminal restriction fragment profiles of 16S rRNA genes from bacterial communities

J Dunbar, LO Ticknor, CR Kuske - Applied and environmental …, 2001 - journals.asm.org
Terminal restriction fragment (TRF) analysis of 16S rRNA genes is an increasingly popular
method for rapid comparison of microbial communities, but analysis of the data is still in a …

[PDF][PDF] Terminal restriction fragment length polymorphism (T-RFLP): an emerging method for characterizing diversity among homologous populations of amplification …

TL Marsh - Current opinion in microbiology, 1999 - researchgate.net
Introduction As its name implies, tcrminal rcstriction fragment length polymorphism (I-RI IP)
analysis measures the size polymorphism of terminal restriction fragments from a l'CR …