Fast-forward breeding for a food-secure world
Crop production systems need to expand their outputs sustainably to feed a burgeoning
human population. Advances in genome sequencing technologies combined with efficient …
human population. Advances in genome sequencing technologies combined with efficient …
Hepatic stellate cells: current state and open questions
C Kordes, HH Bock, D Reichert, P May… - Biological …, 2021 - degruyter.com
This review article summarizes 20 years of our research on hepatic stellate cells within the
framework of two collaborative research centers CRC575 and CRC974 at the Heinrich …
framework of two collaborative research centers CRC575 and CRC974 at the Heinrich …
Benchmark problems for dynamic modeling of intracellular processes
Motivation Dynamic models are used in systems biology to study and understand cellular
processes like gene regulation or signal transduction. Frequently, ordinary differential …
processes like gene regulation or signal transduction. Frequently, ordinary differential …
Biotechnological studies towards improvement of finger millet using multi-omics approaches
A plethora of studies have uncovered numerous important genes with agricultural
significance in staple crops. However, when it comes to orphan crops like minor millet …
significance in staple crops. However, when it comes to orphan crops like minor millet …
Cell-to-cell variability in JAK2/STAT5 pathway components and cytoplasmic volumes defines survival threshold in erythroid progenitor cells
Survival or apoptosis is a binary decision in individual cells. However, at the cell-population
level, a graded increase in survival of colony-forming unit-erythroid (CFU-E) cells is …
level, a graded increase in survival of colony-forming unit-erythroid (CFU-E) cells is …
Likelihood-ratio test statistic for the finite-sample case in nonlinear ordinary differential equation models
Likelihood ratios are frequently utilized as basis for statistical tests, for model selection
criteria and for assessing parameter and prediction uncertainties, eg using the profile …
criteria and for assessing parameter and prediction uncertainties, eg using the profile …
Mathematical biology: Expand, expose, and educate!
S Lee, LS Clinedinst - Bulletin of Mathematical Biology, 2020 - Springer
Mathematical biology has made significant contributions and advancements in the biological
sciences. Recruitment efforts focus on encouraging students, especially those who are …
sciences. Recruitment efforts focus on encouraging students, especially those who are …
Neural Ordinary Differential Equations Inspired Parameterization of Kinetic Models
P Lent, O Bunkova, L Planken, J Schmitz, T Abeel - bioRxiv, 2024 - biorxiv.org
Motivation: Metabolic kinetic models are widely used to model biological systems. Despite
their widespread use, it remains challenging to parameterize these Ordinary Differential …
their widespread use, it remains challenging to parameterize these Ordinary Differential …
Realistic simulation of time-course measurements in systems biology
J Egert, C Kreutz - bioRxiv, 2023 - biorxiv.org
Motivation In systems biology, the analysis of complex nonlinear systems faces many
methodological challenges. However, the performance evaluation of competing methods is …
methodological challenges. However, the performance evaluation of competing methods is …
[PDF][PDF] Dynamic models in systems biology and pharmacology:: from molecular networks to patient populations
D Lill - 2022 - freidok.uni-freiburg.de
The success of physics in the endeavor of understanding the natural world is based on the
ability to formulate the laws of nature in the language of mathematics. Not only allow …
ability to formulate the laws of nature in the language of mathematics. Not only allow …