RNA-Seq technology and its application in fish transcriptomics

X Qian, Y Ba, Q Zhuang, G Zhong - Omics: a journal of integrative …, 2014 - liebertpub.com
High-throughput sequencing technologies, also known as next-generation sequencing
(NGS) technologies, have revolutionized the way that genomic research is advancing. In …

Columnaris disease in fish: a review with emphasis on bacterium-host interactions

AM Declercq, F Haesebrouck, W Van den Broeck… - Veterinary …, 2013 - Springer
Flavobacterium columnare (F. columnare) is the causative agent of columnaris disease. This
bacterium affects both cultured and wild freshwater fish including many susceptible …

[BOOK][B] Bacterial fish pathogens: disease of farmed and wild fish

B Austin, DA Austin - 2016 - books.google.com
This book puts emphasis on the isolation, taxonomy, diagnosis (phenotypic, serology and
molecular biology), epizootiology, pathogenicity mechanisms, and methods of disease …

Transcriptome analysis based on RNA-Seq in understanding pathogenic mechanisms of diseases and the immune system of fish: a comprehensive review

A Sudhagar, G Kumar, M El-Matbouli - International journal of molecular …, 2018 - mdpi.com
In recent years, with the advent of next-generation sequencing along with the development
of various bioinformatics tools, RNA sequencing (RNA-Seq)-based transcriptome analysis …

Applying genetic technologies to combat infectious diseases in aquaculture

NA Robinson, D Robledo, L Sveen… - Reviews in …, 2023 - Wiley Online Library
Disease and parasitism cause major welfare, environmental and economic concerns for
global aquaculture. In this review, we examine the status and potential of technologies that …

Fish mucosal immunity: skin

MÁ Esteban, R Cerezuela - Mucosal health in aquaculture, 2015 - Elsevier
In this chapter, the current knowledge of mucosal immunity in fish skin is described. Skin is
considered the largest immunologically active organ in fish and is remarkably different from …

Enhancing aquaculture disease resistance: Antimicrobial peptides and gene editing

J Wang, Y Cheng - Reviews in Aquaculture, 2024 - Wiley Online Library
Previous studies have demonstrated that CRISPR/Cas9‐mediated genome editing and
transgenesis by integrating vector‐engineered antimicrobial peptide genes (AMGs) are …

A genome-wide association study in catfish reveals the presence of functional hubs of related genes within QTLs for columnaris disease resistance

X Geng, J Sha, S Liu, L Bao, J Zhang, R Wang, J Yao… - BMC genomics, 2015 - Springer
Background Columnaris causes severe mortalities among many different wild and cultured
freshwater fish species, but understanding of host resistance is lacking. Catfish, the primary …

Transcriptomic profiling revealed the signatures of intestinal barrier alteration and pathogen entry in turbot (Scophthalmus maximus) following Vibrio anguillarum …

C Gao, Q Fu, B Su, S Zhou, F Liu, L Song… - Developmental & …, 2016 - Elsevier
The mucosal immune system serves as the frontline barriers of host defense against
pathogen infection, especially for the fishes, which are living in the pathogen rich aquatic …

Evasion of mucosal defenses during Aeromonas hydrophila infection of channel catfish (Ictalurus punctatus) skin

C Li, R Wang, B Su, Y Luo, J Terhune, B Beck… - Developmental & …, 2013 - Elsevier
The mucosal surfaces of fish serve as the first line of defense against the myriad of aquatic
pathogens present in the aquatic environment. The immune repertoire functioning at these …