A world of opportunities with nanopore sequencing

RM Leggett, MD Clark - Journal of experimental botany, 2017 - academic.oup.com
Abstract Oxford Nanopore Technologies' MinION sequencer was launched in pre-release
form in 2014 and represents an exciting new sequencing paradigm. The device offers multi …

[HTML][HTML] The long reads ahead: de novo genome assembly using the MinION

C de Lannoy, D de Ridder, J Risse - F1000Research, 2017 - ncbi.nlm.nih.gov
Nanopore technology provides a novel approach to DNA sequencing that yields long, label-
free reads of constant quality. The first commercial implementation of this approach, the …

Comprehensive evaluation of non-hybrid genome assembly tools for third-generation PacBio long-read sequence data

V Jayakumar, Y Sakakibara - Briefings in bioinformatics, 2019 - academic.oup.com
Long reads obtained from third-generation sequencing platforms can help overcome the
long-standing challenge of the de novo assembly of sequences for the genomic analysis of …

The potential impact of nanopore sequencing on human genetics

MW Loose - Human Molecular Genetics, 2017 - academic.oup.com
Nanopore sequencing has been available to researchers for a little over 3 years. Recently,
the milestone of sequencing and assembling a human genome on this platform was …

复杂基因组测序技术研究进展

高胜寒, 禹海英, 吴双阳, 王森, 耿佳宁, 骆迎峰… - 遗传, 2018 - chinagene.cn
复杂基因组指的是无法使用常规测序和组装手段直接解析的一类基因组, 通常指包含高比例重复
序列, 高杂合度, 极端GC 含量, 存在难消除异源DNA 污染的基因组. 为了解决复杂基因组的测序 …

Independent assessment and improvement of wheat genome assemblies using Fosill jum** libraries

FH Lu, N McKenzie, G Kettleborough, D Heavens… - bioRxiv, 2017 - biorxiv.org
Background The accurate sequencing and assembly of very large, often polyploid, genomes
remain a challenging task, limiting long range sequence information and phased sequence …

Comparative genomic analyses of cyanobacteria

CCBR Barata - 2017 - repositorio.ul.pt
Cyanobacteria are photosynthetic organisms that can be found in water bodies worldwide.
Cyanobacterial lineage evolution resulted in numerous color, shape and colony-forming …

Sequencing and Annotation of Diploid Oat Genomes and the Investigation of Avena-Specific Nutrients

RN Walstead - 2019 - search.proquest.com
Cultivated hexaploid oat (Avena sativa) has held a significant place within the global crop
community for centuries; although its cultivation has decreased over the past century, its …

Computational pipelines for assembly, analysis, and evaluation of genome sequences

V Jayakumar - 2018 - core.ac.uk
Computational pipelines for assembly, analysis, and evaluation of genome sequences(要旨)
Page 1 A Thesis for the Degree of Ph.D. in Science Computational pipelines for assembly …

Identification of Proteins Involved in Salinity Tolerance in Salicornia bigelovii

OR Salazar Moya - 2017 - repository.kaust.edu.sa
With a global growing demand in food production, agricultural output must increase
accordingly. An increased use of saline soils and brackish water would contribute to the …