Coiled coil protein origami: from modular design principles towards biotechnological applications

F Lapenta, J Aupič, Ž Strmšek, R Jerala - Chemical Society Reviews, 2018 - pubs.rsc.org
The design of new protein folds represents a grand challenge for synthetic, chemical and
structural biology. Due to the good understanding of the principles governing its pairing …

Bottom-up approaches to engineered living materials: Challenges and future directions

S Molinari, RF Tesoriero, CM Ajo-Franklin - Matter, 2021 - cell.com
Biomaterials made by living systems, while very diverse, generally share similar
organization: different lineages of cells are precisely patterned within a matrix to create a …

[HTML][HTML] Universal chimeric antigen receptors for multiplexed and logical control of T cell responses

JH Cho, JJ Collins, WW Wong - Cell, 2018 - cell.com
T cells expressing chimeric antigen receptors (CARs) are promising cancer therapeutic
agents, with the prospect of becoming the ultimate smart cancer therapeutics. To expand the …

Controllable protein phase separation and modular recruitment to form responsive membraneless organelles

BS Schuster, EH Reed, R Parthasarathy… - Nature …, 2018 - nature.com
Many intrinsically disordered proteins self-assemble into liquid droplets that function as
membraneless organelles. Because of their biological importance and ability to colocalize …

Designer membraneless organelles sequester native factors for control of cell behavior

MV Garabedian, W Wang, JB Dabdoub, M Tong… - Nature chemical …, 2021 - nature.com
Subcellular compartmentalization of macromolecules increases flux and prevents inhibitory
interactions to control biochemical reactions. Inspired by this functionality, we sought to build …

Genomic mining of prokaryotic repressors for orthogonal logic gates

BC Stanton, AAK Nielsen, A Tamsir, K Clancy… - Nature chemical …, 2014 - nature.com
Genetic circuits perform computational operations based on interactions between freely
diffusing molecules within a cell. When transcription factors are combined to build a circuit …

Programmable design of orthogonal protein heterodimers

Z Chen, SE Boyken, M Jia, F Busch, D Flores-Solis… - Nature, 2019 - nature.com
Specificity of interactions between two DNA strands, or between protein and DNA, is often
achieved by varying bases or side chains coming off the DNA or protein backbone—for …

Massively parallel measurement of protein–protein interactions by sequencing using MP3-seq

A Baryshev, A La Fleur, B Groves, C Michel… - Nature chemical …, 2024 - nature.com
Protein–protein interactions (PPIs) regulate many cellular processes and engineered PPIs
have cell and gene therapy applications. Here, we introduce massively parallel PPI …

Artificial Multienzyme Scaffolds: Pursuing in Vitro Substrate Channeling with an Overview of Current Progress

GA Ellis, WP Klein, G Lasarte-Aragonés, M Thakur… - ACS …, 2019 - ACS Publications
Artificial multienzyme scaffolds are being developed for in vitro cascaded biocatalytic activity
and, in particular, accessing substrate channeling. This review covers progress in this field …

A Basis Set of de Novo Coiled-Coil Peptide Oligomers for Rational Protein Design and Synthetic Biology

JM Fletcher, AL Boyle, M Bruning, GJ Bartlett… - ACS synthetic …, 2012 - ACS Publications
Protein engineering, chemical biology, and synthetic biology would benefit from toolkits of
peptide and protein components that could be exchanged reliably between systems while …